Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 AL157700.1-201ENST00000561973 1432 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 AC011477.1-204ENST00000623416 1325 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 OR56A5-201ENST00000340110 738 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 AL161781.1-201ENST00000354277 403 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 RNU6-335P-201ENST00000364563 113 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 RNU6-712P-201ENST00000410558 100 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 RNA5SP508-201ENST00000411327 119 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 AL592148.1-201ENST00000413568 445 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 RAD23BP2-201ENST00000416003 1207 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 EI24P1-201ENST00000416584 867 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 AC007742.1-201ENST00000425789 329 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 AC063976.3-201ENST00000426849 329 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 TXNL1P1-201ENST00000429528 554 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 ELOCP26-201ENST00000436067 329 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 CST9LP2-201ENST00000437612 320 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 MTCYBP3-201ENST00000445588 1137 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 AL513124.1-201ENST00000450410 614 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 ART2BP-201ENST00000453501 499 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 RPL9P32-201ENST00000464118 620 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 AC004062.1-201ENST00000509926 645 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 RNU6-1129P-201ENST00000515964 104 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 AP004242.1-201ENST00000533701 349 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 AC007954.1-201ENST00000554198 494 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 AC012182.1-201ENST00000570133 895 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 BNIP3P23-201ENST00000599655 511 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 XIAPP1-201ENST00000603162 600 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 AP000676.3-201ENST00000623299 569 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 AP001486.2-201ENST00000561652 5113 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 AC093908.1-201ENST00000623125 8092 ntBASIC3.65□□□□□ -1.82
ZNF541Q9H0D2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ZNF541Q9H0D2 AL049780.3-201ENST00000624612 1583 ntBASIC3.65□□□□□ -1.82
ZNF541Q9H0D2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ZNF541Q9H0D2 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 RPS4XP5-202ENST00000449995 1334 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 AL672167.1-206ENST00000356293 943 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 RPL7P25-201ENST00000404151 721 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 RNU2-52P-201ENST00000410680 190 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 HMGB1P11-201ENST00000413899 637 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 RPL30P2-201ENST00000414021 291 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 MTCYBP45-201ENST00000435243 565 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 LSM1P1-201ENST00000438629 273 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 AL117351.1-201ENST00000438864 766 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 AC010095.1-201ENST00000443543 144 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 AC078817.1-201ENST00000492623 435 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 RPL7P47-201ENST00000497299 556 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 SCGB1D5P-201ENST00000515134 247 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 MTCYBP41-201ENST00000528913 1123 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 DUXAP11-201ENST00000603858 526 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 AC068313.1-201ENST00000604028 1008 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 AL034351.1-201ENST00000605288 668 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 AC012531.5-201ENST00000611375 151 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.65□□□□□ -1.83
ZNF541Q9H0D2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
ZNF541Q9H0D2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
ZNF541Q9H0D2 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.64□□□□□ -1.83
ZNF541Q9H0D2 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.64□□□□□ -1.83
ZNF541Q9H0D2 RNA5SP189-201ENST00000364920 115 ntBASIC3.64□□□□□ -1.83
ZNF541Q9H0D2 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.64□□□□□ -1.83
ZNF541Q9H0D2 Y_RNA.560-201ENST00000384689 102 ntBASIC3.64□□□□□ -1.83
ZNF541Q9H0D2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
ZNF541Q9H0D2 AL356421.1-201ENST00000403255 413 ntBASIC3.64□□□□□ -1.83
ZNF541Q9H0D2 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ZNF541Q9H0D2 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.64□□□□□ -1.83
ZNF541Q9H0D2 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.64□□□□□ -1.83
ZNF541Q9H0D2 RPL21P66-201ENST00000426566 466 ntBASIC3.64□□□□□ -1.83
ZNF541Q9H0D2 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.64□□□□□ -1.83
ZNF541Q9H0D2 AC010285.1-201ENST00000470580 392 ntBASIC3.64□□□□□ -1.83
ZNF541Q9H0D2 BZW1P2-201ENST00000473537 826 ntBASIC3.64□□□□□ -1.83
ZNF541Q9H0D2 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.64□□□□□ -1.83
ZNF541Q9H0D2 AP001086.1-201ENST00000494882 321 ntBASIC3.64□□□□□ -1.83
ZNF541Q9H0D2 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.64□□□□□ -1.83
ZNF541Q9H0D2 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.64□□□□□ -1.83
ZNF541Q9H0D2 AC111000.2-201ENST00000507775 550 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms