Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 TXNP7-201ENST00000406296 293 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 RNU2-36P-201ENST00000410361 191 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 MRPL50P2-201ENST00000416821 482 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 GABPAP-201ENST00000419271 1356 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 PPP1R11P2-201ENST00000423543 382 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 AL732292.1-201ENST00000426692 226 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 AC122718.1-201ENST00000439448 744 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 ZNF962P-201ENST00000443465 3140 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 FAM133DP-201ENST00000464802 691 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 RN7SL691P-201ENST00000494487 301 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 RNU6-1281P-201ENST00000516223 105 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 RNU6-390P-201ENST00000516259 103 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 AC104383.1-201ENST00000530297 370 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 TRAV8-5-201ENST00000537369 341 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 FAM60BP-201ENST00000578364 658 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 MIR4284-201ENST00000578924 81 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 AP002360.4-201ENST00000606980 481 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 AC093788.1-201ENST00000609356 927 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 AC092326.2-201ENST00000624772 1561 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 ZNF680P1-201ENST00000436625 1469 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 AC073343.1-201ENST00000328239 651 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 AC110754.1-201ENST00000399740 601 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 RNU2-39P-201ENST00000410604 198 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 AC079780.1-201ENST00000428259 207 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 USP12PX-201ENST00000432383 1057 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 RPL21P112-201ENST00000434403 463 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 AC024082.2-201ENST00000434771 238 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 MTND4P18-201ENST00000447010 465 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 HMGB3P22-202ENST00000451823 572 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 AC109327.1-201ENST00000471666 403 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 RPL36AP51-201ENST00000487216 318 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 AF213884.1-201ENST00000488102 463 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 FAM92A1P2-202ENST00000504766 877 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 AC099522.1-202ENST00000514718 367 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 ERHP1-201ENST00000523006 310 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 MTND1P35-201ENST00000526739 508 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 AC109635.4-202ENST00000531666 412 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 AL162413.1-201ENST00000603198 110 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 AP000907.4-201ENST00000604143 237 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM54Q9BYV2 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 AL157700.1-201ENST00000561973 1432 ntBASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 EXOC5P1-201ENST00000510543 1969 ntBASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 MIR383-201ENST00000362257 73 ntBASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 SNORA7.2-201ENST00000364446 145 ntBASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 RNA5SP513-201ENST00000364648 118 ntBASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 Y_RNA.367-201ENST00000365544 101 ntBASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 RNU6-877P-201ENST00000383868 107 ntBASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 RNU6-76P-201ENST00000384060 104 ntBASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 RNU6-74P-201ENST00000384235 107 ntBASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 U3.22-201ENST00000391120 215 ntBASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 SNORA3C-201ENST00000408792 125 ntBASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 RPL23AP26-201ENST00000412728 464 ntBASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 MTCO1P39-201ENST00000426148 480 ntBASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM54Q9BYV2 COX6B1P7-201ENST00000430845 235 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms