Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 SMG1P5-202ENST00000529428 4219 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 SMG1P2-201ENST00000566127 4221 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 RNU6-1255P-201ENST00000363434 112 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 RNU6-312P-201ENST00000364629 107 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 Y_RNA.571-201ENST00000384753 98 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 MIR569-201ENST00000385228 96 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 DUTP5-201ENST00000406790 469 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 MIR1231-201ENST00000408101 92 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 SNORA77.2-201ENST00000408571 112 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 MICG-208ENST00000416822 132 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 AL451062.2-201ENST00000427515 271 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 RPL7L1P9-201ENST00000431298 745 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 AC138761.5-201ENST00000433967 325 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 RPL3P11-201ENST00000434028 1146 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 RPS20P1-201ENST00000434853 354 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 UQCRBP2-201ENST00000447827 297 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 RN7SL352P-201ENST00000466002 277 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 RPS4XP22-201ENST00000480755 780 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 PPIAP19-201ENST00000486414 492 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 RN7SL714P-201ENST00000487050 298 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 AC097462.2-201ENST00000504623 481 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 RNU6-143P-201ENST00000516942 93 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 IGKV2D-36-201ENST00000518643 226 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 AL133399.1-201ENST00000527476 298 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 TRAV37-201ENST00000553906 342 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 MIR4675-201ENST00000577898 77 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 MIR4312-201ENST00000579909 76 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 MIR6726-201ENST00000613751 61 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 MIR6829-201ENST00000620375 67 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 AC099506.2-201ENST00000623074 221 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 AC004817.4-201ENST00000602396 3625 ntBASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
SSBP4Q9BWG4 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 Y_RNA.123-201ENST00000363338 102 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 RN7SKP128-201ENST00000364270 303 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 RNU6-879P-201ENST00000364328 108 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 SNORD116-14-201ENST00000383894 92 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 SNORD116-17-201ENST00000383929 92 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 SNORD116-15-201ENST00000384445 92 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 SNORD116-20-201ENST00000384529 92 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 SNORD116-19-201ENST00000384729 92 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 MIR135A2-201ENST00000384854 100 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 AL133388.1-201ENST00000404509 287 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 RN7SKP39-201ENST00000410773 322 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 AC090774.1-201ENST00000435925 246 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 COL11A2P1-205ENST00000441798 676 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 HIGD1AP2-201ENST00000446367 280 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 AKR1D1P1-201ENST00000457236 936 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 AC073901.1-201ENST00000462471 408 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 RN7SL515P-201ENST00000463999 297 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 AC012158.1-204ENST00000483430 465 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 AC022493.1-201ENST00000492984 337 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 AC010409.2-201ENST00000505780 478 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 AC093870.1-201ENST00000506837 213 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 AC108043.1-201ENST00000512696 574 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 HIGD1AP3-201ENST00000515857 278 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 RNA5SP230-201ENST00000517039 122 ntBASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC4.52□□□□□ -1.69
SSBP4Q9BWG4 AP004609.2-201ENST00000532177 190 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms