Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC090515.1-201ENST00000465295 476 ntBASIC2.22□□□□□ -2.05
ABCA3Q99758 HMGN2P13-201ENST00000476476 274 ntBASIC2.22□□□□□ -2.05
ABCA3Q99758 AC010625.1-201ENST00000511296 403 ntBASIC2.22□□□□□ -2.05
ABCA3Q99758 AC022079.2-201ENST00000619739 566 ntBASIC2.22□□□□□ -2.05
ABCA3Q99758 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.22□□□□□ -2.05
ABCA3Q99758 ZNF876P-202ENST00000398732 1485 ntBASIC2.22□□□□□ -2.05
ABCA3Q99758 AC093536.2-201ENST00000565257 1406 ntBASIC2.22□□□□□ -2.05
ABCA3Q99758 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
ABCA3Q99758 SNORD56.5-201ENST00000364281 72 ntBASIC2.21□□□□□ -2.06
ABCA3Q99758 RNA5SP138-201ENST00000365098 114 ntBASIC2.21□□□□□ -2.06
ABCA3Q99758 Y_RNA.327-201ENST00000365201 102 ntBASIC2.21□□□□□ -2.06
ABCA3Q99758 Z98749.2-208ENST00000381646 500 ntBASIC2.21□□□□□ -2.06
ABCA3Q99758 RNU6-1027P-201ENST00000383998 107 ntBASIC2.21□□□□□ -2.06
ABCA3Q99758 RPL23AP33-201ENST00000442301 452 ntBASIC2.21□□□□□ -2.06
ABCA3Q99758 AC007395.1-201ENST00000451333 677 ntBASIC2.21□□□□□ -2.06
ABCA3Q99758 AC069528.1-202ENST00000482888 637 ntBASIC2.21□□□□□ -2.06
ABCA3Q99758 AC005912.1-201ENST00000495392 255 ntBASIC2.21□□□□□ -2.06
ABCA3Q99758 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.21□□□□□ -2.06
ABCA3Q99758 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.21□□□□□ -2.06
ABCA3Q99758 MIR4419B-201ENST00000577260 68 ntBASIC2.21□□□□□ -2.06
ABCA3Q99758 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.21□□□□□ -2.06
ABCA3Q99758 AC126118.1-201ENST00000607744 628 ntBASIC2.21□□□□□ -2.06
ABCA3Q99758 AC022709.1-201ENST00000615967 87 ntBASIC2.21□□□□□ -2.06
ABCA3Q99758 AL121594.5-201ENST00000631724 573 ntBASIC2.21□□□□□ -2.06
ABCA3Q99758 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.21□□□□□ -2.06
ABCA3Q99758 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.21□□□□□ -2.06
ABCA3Q99758 AP002907.1-201ENST00000606361 1430 ntBASIC2.21□□□□□ -2.06
ABCA3Q99758 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
ABCA3Q99758 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.2□□□□□ -2.06
ABCA3Q99758 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 RNU6-1-201ENST00000383898 107 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 RNU6-42P-201ENST00000384165 107 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 RNU6-36P-201ENST00000384172 107 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 RNU6-4P-201ENST00000384205 107 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 RNU6-5P-201ENST00000384238 107 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 RNU6-3P-201ENST00000384314 107 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 RNU6-2-201ENST00000384627 107 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 RNU6-9-201ENST00000384776 107 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 RNU6-33P-201ENST00000384793 107 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 AC240504.1-201ENST00000395709 845 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.2□□□□□ -2.06
ABCA3Q99758 AC013404.1-201ENST00000413068 249 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.2□□□□□ -2.06
ABCA3Q99758 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.2□□□□□ -2.06
ABCA3Q99758 AC009220.3-201ENST00000604318 586 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 HSPE1P14-201ENST00000605812 302 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 RNU6-6P-201ENST00000606623 107 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 AC104307.1-201ENST00000616142 196 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 MIR6515-201ENST00000619843 57 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.2□□□□□ -2.06
ABCA3Q99758 CKAP2P1-201ENST00000555477 2049 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
ABCA3Q99758 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.2□□□□□ -2.06
ABCA3Q99758 POLR2J4-204ENST00000418424 324 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 BX510359.4-201ENST00000423750 193 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.2□□□□□ -2.06
ABCA3Q99758 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.2□□□□□ -2.06
ABCA3Q99758 AL109741.2-201ENST00000455561 343 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.2□□□□□ -2.06
ABCA3Q99758 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.2□□□□□ -2.06
ABCA3Q99758 RNA5SP82-201ENST00000516707 92 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 AL121917.1-203ENST00000605534 577 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 MIR6734-201ENST00000621166 68 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.2□□□□□ -2.06
ABCA3Q99758 AP000553.5-201ENST00000641933 54 ntBASIC2.2□□□□□ -2.06
ABCA3Q99758 AC005336.3-201ENST00000623833 2679 ntBASIC2.19□□□□□ -2.06
ABCA3Q99758 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ABCA3Q99758 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ABCA3Q99758 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ABCA3Q99758 USP9YP27-201ENST00000418455 438 ntBASIC2.19□□□□□ -2.06
ABCA3Q99758 BNIP3P2-201ENST00000441221 577 ntBASIC2.19□□□□□ -2.06
ABCA3Q99758 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.19□□□□□ -2.06
ABCA3Q99758 TRBV8-1-201ENST00000481590 279 ntBASIC2.19□□□□□ -2.06
ABCA3Q99758 AC135721.1-201ENST00000497954 479 ntBASIC2.19□□□□□ -2.06
ABCA3Q99758 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.19□□□□□ -2.06
ABCA3Q99758 RNU6-711P-201ENST00000517255 106 ntBASIC2.19□□□□□ -2.06
ABCA3Q99758 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.19□□□□□ -2.06
ABCA3Q99758 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.19□□□□□ -2.06
ABCA3Q99758 AL049838.1-201ENST00000563647 981 ntBASIC2.19□□□□□ -2.06
ABCA3Q99758 AC015720.1-201ENST00000565251 277 ntBASIC2.19□□□□□ -2.06
ABCA3Q99758 RNY1-201ENST00000364228 113 ntBASIC2.18□□□□□ -2.06
ABCA3Q99758 Y_RNA.374-201ENST00000365606 101 ntBASIC2.18□□□□□ -2.06
ABCA3Q99758 MIR607-201ENST00000385241 96 ntBASIC2.18□□□□□ -2.06
ABCA3Q99758 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.18□□□□□ -2.06
ABCA3Q99758 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.18□□□□□ -2.06
ABCA3Q99758 RPS15AP7-201ENST00000439294 405 ntBASIC2.18□□□□□ -2.06
ABCA3Q99758 RPS26P56-201ENST00000444468 240 ntBASIC2.18□□□□□ -2.06
ABCA3Q99758 RPL21P134-201ENST00000453468 483 ntBASIC2.18□□□□□ -2.06
ABCA3Q99758 OR7L1P-201ENST00000456181 380 ntBASIC2.18□□□□□ -2.06
ABCA3Q99758 AC090071.1-201ENST00000507713 644 ntBASIC2.18□□□□□ -2.06
ABCA3Q99758 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.18□□□□□ -2.06
ABCA3Q99758 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.18□□□□□ -2.06
ABCA3Q99758 MIR4448-201ENST00000584360 86 ntBASIC2.18□□□□□ -2.06
ABCA3Q99758 AC092159.4-201ENST00000624944 550 ntBASIC2.18□□□□□ -2.06
ABCA3Q99758 SNORA7.1-201ENST00000363750 139 ntBASIC2.17□□□□□ -2.06
ABCA3Q99758 AL034374.1-201ENST00000406329 351 ntBASIC2.17□□□□□ -2.06
ABCA3Q99758 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.17□□□□□ -2.06
ABCA3Q99758 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.17□□□□□ -2.06
ABCA3Q99758 RPS6P14-201ENST00000425165 719 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms