Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC010329.2-201ENST00000595195 2737 ntBASIC1.31□□□□□ -2.2
COL12A1Q99715 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.31□□□□□ -2.2
COL12A1Q99715 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.31□□□□□ -2.2
COL12A1Q99715 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.31□□□□□ -2.2
COL12A1Q99715 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.31□□□□□ -2.2
COL12A1Q99715 RSL24D1P2-201ENST00000445584 366 ntBASIC1.31□□□□□ -2.2
COL12A1Q99715 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
COL12A1Q99715 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.31□□□□□ -2.2
COL12A1Q99715 AC000367.1-201ENST00000452711 1766 ntBASIC1.3□□□□□ -2.2
COL12A1Q99715 AF274854.1-201ENST00000413236 615 ntBASIC1.3□□□□□ -2.2
COL12A1Q99715 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.3□□□□□ -2.2
COL12A1Q99715 EZH2P1-201ENST00000431167 291 ntBASIC1.3□□□□□ -2.2
COL12A1Q99715 TPRKBP1-201ENST00000456243 481 ntBASIC1.3□□□□□ -2.2
COL12A1Q99715 RNU6-1132P-201ENST00000459214 107 ntBASIC1.3□□□□□ -2.2
COL12A1Q99715 RNA5SP121-201ENST00000516537 101 ntBASIC1.3□□□□□ -2.2
COL12A1Q99715 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.3□□□□□ -2.2
COL12A1Q99715 AC067852.7-201ENST00000623270 535 ntBASIC1.3□□□□□ -2.2
COL12A1Q99715 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
COL12A1Q99715 AC018630.2-201ENST00000534866 2403 ntBASIC1.3□□□□□ -2.2
COL12A1Q99715 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.3□□□□□ -2.2
COL12A1Q99715 RPS6P15-201ENST00000431996 751 ntBASIC1.3□□□□□ -2.2
COL12A1Q99715 DYNLL1P5-201ENST00000467158 270 ntBASIC1.3□□□□□ -2.2
COL12A1Q99715 MIR4419B-201ENST00000577260 68 ntBASIC1.3□□□□□ -2.2
COL12A1Q99715 AC090970.3-201ENST00000612566 866 ntBASIC1.3□□□□□ -2.2
COL12A1Q99715 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
COL12A1Q99715 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC1.29□□□□□ -2.2
COL12A1Q99715 Y_RNA.258-201ENST00000364613 105 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 U3.40-201ENST00000408706 208 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 AL445305.1-201ENST00000432577 575 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
COL12A1Q99715 AC009961.3-201ENST00000449832 765 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
COL12A1Q99715 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
COL12A1Q99715 SNORA31.24-201ENST00000517232 57 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.29□□□□□ -2.2
COL12A1Q99715 AL049779.4-201ENST00000604500 156 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
COL12A1Q99715 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
COL12A1Q99715 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
COL12A1Q99715 CKS1BP5-201ENST00000434172 273 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 NDUFS5P3-201ENST00000450668 321 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.29□□□□□ -2.2
COL12A1Q99715 MTCYBP18-201ENST00000501056 747 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.29□□□□□ -2.2
COL12A1Q99715 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.29□□□□□ -2.2
COL12A1Q99715 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.29□□□□□ -2.2
COL12A1Q99715 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.29□□□□□ -2.2
COL12A1Q99715 AC090819.1-201ENST00000523800 1111 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 MTND5P21-201ENST00000531961 522 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.29□□□□□ -2.2
COL12A1Q99715 AC023813.2-201ENST00000564321 469 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 BNIP3P4-201ENST00000604946 565 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.29□□□□□ -2.2
COL12A1Q99715 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.29□□□□□ -2.2
COL12A1Q99715 MTCO1P6-201ENST00000481192 1384 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 ZNF271P-202ENST00000465539 1970 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.29□□□□□ -2.2
COL12A1Q99715 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.29□□□□□ -2.2
COL12A1Q99715 AC005297.2-201ENST00000450430 606 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.29□□□□□ -2.2
COL12A1Q99715 AC004223.1-201ENST00000479840 271 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC1.29□□□□□ -2.2
COL12A1Q99715 SNORA31.11-201ENST00000516528 139 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.29□□□□□ -2.2
COL12A1Q99715 AC084851.1-201ENST00000529105 249 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
COL12A1Q99715 MIR3618-201ENST00000580330 88 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 AP001005.3-201ENST00000622049 129 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 AL121594.5-201ENST00000631724 573 ntBASIC1.29□□□□□ -2.2
COL12A1Q99715 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.28□□□□□ -2.2
COL12A1Q99715 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
COL12A1Q99715 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC1.28□□□□□ -2.2
COL12A1Q99715 EBAG9P1-201ENST00000418955 543 ntBASIC1.28□□□□□ -2.2
COL12A1Q99715 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
COL12A1Q99715 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
COL12A1Q99715 KATNBL1P4-201ENST00000503545 918 ntBASIC1.28□□□□□ -2.2
COL12A1Q99715 AC107918.3-201ENST00000533272 382 ntBASIC1.28□□□□□ -2.2
COL12A1Q99715 AC105245.1-201ENST00000581934 244 ntBASIC1.28□□□□□ -2.2
COL12A1Q99715 AC007687.1-201ENST00000602704 304 ntBASIC1.28□□□□□ -2.2
COL12A1Q99715 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.28□□□□□ -2.2
COL12A1Q99715 FO624990.1-201ENST00000636373 85 ntBASIC1.28□□□□□ -2.2
COL12A1Q99715 RPL19P1-201ENST00000411635 428 ntBASIC1.28□□□□□ -2.2
COL12A1Q99715 RPL26P37-201ENST00000411983 438 ntBASIC1.28□□□□□ -2.2
COL12A1Q99715 AL445669.1-201ENST00000426743 755 ntBASIC1.28□□□□□ -2.2
COL12A1Q99715 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.28□□□□□ -2.2
COL12A1Q99715 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.28□□□□□ -2.2
COL12A1Q99715 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.28□□□□□ -2.2
COL12A1Q99715 AC092451.2-201ENST00000538746 658 ntBASIC1.28□□□□□ -2.2
COL12A1Q99715 AC007375.1-201ENST00000554513 578 ntBASIC1.28□□□□□ -2.2
COL12A1Q99715 TRAV28-201ENST00000557548 323 ntBASIC1.28□□□□□ -2.2
COL12A1Q99715 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.28□□□□□ -2.2
COL12A1Q99715 AL121917.1-203ENST00000605534 577 ntBASIC1.28□□□□□ -2.2
COL12A1Q99715 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.28□□□□□ -2.2
COL12A1Q99715 AL449363.1-201ENST00000617815 186 ntBASIC1.28□□□□□ -2.2
COL12A1Q99715 MKKS-204ENST00000639674 192 ntBASIC1.28□□□□□ -2.2
COL12A1Q99715 Y_RNA.274-201ENST00000364714 101 ntBASIC1.27□□□□□ -2.21
COL12A1Q99715 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.27□□□□□ -2.21
COL12A1Q99715 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.27□□□□□ -2.21
COL12A1Q99715 RPS15AP1-201ENST00000457423 391 ntBASIC1.27□□□□□ -2.21
COL12A1Q99715 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms