Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PKP4Q99569 AC006378.2-201ENST00000623178 2476 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
PKP4Q99569 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PKP4Q99569 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PKP4Q99569 RNY3P14-201ENST00000384309 102 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 U8.11-201ENST00000384699 133 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 U8.12-201ENST00000384701 133 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 ARF4P3-201ENST00000397387 509 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 MIR1305-201ENST00000408300 86 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 RN7SKP266-201ENST00000410232 287 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.61□□□□□ -1.83
PKP4Q99569 MTND1P2-201ENST00000430604 821 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.61□□□□□ -1.83
PKP4Q99569 NDUFB1P1-201ENST00000435191 180 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.61□□□□□ -1.83
PKP4Q99569 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.61□□□□□ -1.83
PKP4Q99569 LSM1P1-201ENST00000438629 273 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 GDI2P2-201ENST00000445131 608 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 ARPC3P5-201ENST00000448802 534 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 AC027673.1-201ENST00000456245 405 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 U8.18-201ENST00000459285 133 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 RN7SL93P-201ENST00000463035 293 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 RPS15AP17-201ENST00000470598 390 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.61□□□□□ -1.83
PKP4Q99569 FAM172BP-201ENST00000487497 1089 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.61□□□□□ -1.83
PKP4Q99569 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.61□□□□□ -1.83
PKP4Q99569 AC091133.4-201ENST00000511142 308 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 AC021146.1-201ENST00000511202 716 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 AC105914.1-201ENST00000511798 226 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 RNU6-27P-201ENST00000516146 107 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 RNU6-718P-201ENST00000516166 105 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.61□□□□□ -1.83
PKP4Q99569 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.61□□□□□ -1.83
PKP4Q99569 AC007991.1-201ENST00000522680 631 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 MTND4LP18-201ENST00000526864 291 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 AC022878.1-201ENST00000530684 149 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 RPS3AP4-201ENST00000555161 764 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 HSPE1P3-201ENST00000559254 309 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 AC137800.2-201ENST00000574375 120 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 SNORA59B-202ENST00000578183 701 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.61□□□□□ -1.83
PKP4Q99569 MIR544B-201ENST00000582372 78 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 MIR4307-201ENST00000582802 84 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 MIR5187-201ENST00000583479 76 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.61□□□□□ -1.83
PKP4Q99569 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.61□□□□□ -1.83
PKP4Q99569 AC112191.3-201ENST00000604371 277 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 AP000860.1-201ENST00000605250 559 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 AL034351.1-201ENST00000605288 668 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 RNU1-30P-201ENST00000606575 163 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.61□□□□□ -1.83
PKP4Q99569 AC103710.1-201ENST00000610003 901 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 CR381653.2-201ENST00000624041 768 ntBASIC3.61□□□□□ -1.83
PKP4Q99569 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
PKP4Q99569 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
PKP4Q99569 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.61□□□□□ -1.83
PKP4Q99569 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.61□□□□□ -1.83
PKP4Q99569 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PKP4Q99569 ELF2P3-201ENST00000445099 1506 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 AC005183.1-201ENST00000603687 1979 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.6□□□□□ -1.83
PKP4Q99569 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PKP4Q99569 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PKP4Q99569 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PKP4Q99569 MIR423-201ENST00000362201 94 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 Y_RNA.88-201ENST00000363029 99 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 RNU1-18P-201ENST00000363062 164 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 RNU6-878P-201ENST00000384578 110 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 RAP1BP3-201ENST00000407180 549 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 SNORA57.3-201ENST00000411095 141 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.6□□□□□ -1.83
PKP4Q99569 RPL21P109-201ENST00000422213 475 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 AC007742.1-201ENST00000425789 329 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.6□□□□□ -1.83
PKP4Q99569 ELOCP26-201ENST00000436067 329 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 SKP1P1-201ENST00000438081 489 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 AC122718.1-201ENST00000439448 744 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.6□□□□□ -1.83
PKP4Q99569 AL590365.1-201ENST00000450788 243 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 NANOGP10-201ENST00000453325 895 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.6□□□□□ -1.83
PKP4Q99569 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.6□□□□□ -1.83
PKP4Q99569 RNU7-136P-201ENST00000458819 69 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 FAM133DP-201ENST00000464802 691 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.6□□□□□ -1.83
PKP4Q99569 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.6□□□□□ -1.83
PKP4Q99569 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.6□□□□□ -1.83
PKP4Q99569 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.6□□□□□ -1.83
PKP4Q99569 NDUFB4P2-201ENST00000509515 391 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.6□□□□□ -1.83
PKP4Q99569 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.6□□□□□ -1.83
PKP4Q99569 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.6□□□□□ -1.83
PKP4Q99569 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.6□□□□□ -1.83
PKP4Q99569 AC124947.2-202ENST00000552735 133 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.6□□□□□ -1.83
PKP4Q99569 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.6□□□□□ -1.83
PKP4Q99569 MIR3913-1-201ENST00000577744 102 ntBASIC3.6□□□□□ -1.83
PKP4Q99569 MIR548S-201ENST00000581352 82 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms