Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.47□□□□□ -1.69
NUP88Q99567 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.47□□□□□ -1.69
NUP88Q99567 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
NUP88Q99567 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.47□□□□□ -1.69
NUP88Q99567 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NUP88Q99567 AL645937.1-201ENST00000641739 1652 ntBASIC4.47□□□□□ -1.69
NUP88Q99567 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NUP88Q99567 AC018529.3-201ENST00000624212 2254 ntBASIC4.47□□□□□ -1.69
NUP88Q99567 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
NUP88Q99567 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.46□□□□□ -1.69
NUP88Q99567 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
NUP88Q99567 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP88Q99567 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NUP88Q99567 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NUP88Q99567 RPL21P17-201ENST00000397467 475 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 RPL7P60-201ENST00000397636 735 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.46□□□□□ -1.7
NUP88Q99567 SYF2P2-201ENST00000417620 583 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 AC133104.1-201ENST00000429100 218 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.46□□□□□ -1.7
NUP88Q99567 USP9YP28-201ENST00000435142 589 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.46□□□□□ -1.7
NUP88Q99567 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.46□□□□□ -1.7
NUP88Q99567 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.46□□□□□ -1.7
NUP88Q99567 AC079448.1-201ENST00000449377 373 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 C1DP4-201ENST00000455429 424 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 AL359385.1-201ENST00000456509 365 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.46□□□□□ -1.7
NUP88Q99567 AL133162.1-201ENST00000463228 453 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 AL049714.1-201ENST00000466686 347 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NUP88Q99567 VN1R104P-201ENST00000505115 1009 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 AC022483.1-201ENST00000514020 567 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 RNU6-506P-201ENST00000516553 94 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 RNU6-314P-201ENST00000516574 104 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 AC109635.4-202ENST00000531666 412 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NUP88Q99567 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.46□□□□□ -1.7
NUP88Q99567 CCNG2P1-201ENST00000549521 1000 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.46□□□□□ -1.7
NUP88Q99567 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.46□□□□□ -1.7
NUP88Q99567 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.46□□□□□ -1.7
NUP88Q99567 FAM60BP-201ENST00000578364 658 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.46□□□□□ -1.7
NUP88Q99567 AL022154.1-201ENST00000604698 785 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 AP000860.1-201ENST00000605250 559 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 AL590282.1-201ENST00000610379 1136 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.46□□□□□ -1.7
NUP88Q99567 AL136313.1-201ENST00000624804 202 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 AC138649.5-201ENST00000637456 137 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 OR5H6-203ENST00000642105 978 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
NUP88Q99567 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.46□□□□□ -1.7
NUP88Q99567 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP88Q99567 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP88Q99567 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NUP88Q99567 AL157700.1-201ENST00000561973 1432 ntBASIC4.46□□□□□ -1.7
NUP88Q99567 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NUP88Q99567 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.45□□□□□ -1.7
NUP88Q99567 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NUP88Q99567 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NUP88Q99567 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.45□□□□□ -1.7
NUP88Q99567 MIR208A-201ENST00000362287 71 ntBASIC4.45□□□□□ -1.7
NUP88Q99567 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.45□□□□□ -1.7
NUP88Q99567 AL109755.1-201ENST00000401791 649 ntBASIC4.45□□□□□ -1.7
NUP88Q99567 FCF1P9-201ENST00000412546 282 ntBASIC4.45□□□□□ -1.7
NUP88Q99567 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.45□□□□□ -1.7
NUP88Q99567 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.45□□□□□ -1.7
NUP88Q99567 AL356535.1-201ENST00000440335 398 ntBASIC4.45□□□□□ -1.7
NUP88Q99567 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.45□□□□□ -1.7
NUP88Q99567 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.45□□□□□ -1.7
NUP88Q99567 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.45□□□□□ -1.7
NUP88Q99567 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.45□□□□□ -1.7
NUP88Q99567 UBE2CP3-201ENST00000502715 450 ntBASIC4.45□□□□□ -1.7
NUP88Q99567 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NUP88Q99567 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NUP88Q99567 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.45□□□□□ -1.7
NUP88Q99567 RNU6-1073P-201ENST00000517182 106 ntBASIC4.45□□□□□ -1.7
NUP88Q99567 RNU6-840P-201ENST00000517275 65 ntBASIC4.45□□□□□ -1.7
NUP88Q99567 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.45□□□□□ -1.7
NUP88Q99567 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NUP88Q99567 AC011979.2-201ENST00000527568 352 ntBASIC4.45□□□□□ -1.7
NUP88Q99567 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.45□□□□□ -1.7
NUP88Q99567 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.45□□□□□ -1.7
NUP88Q99567 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.45□□□□□ -1.7
NUP88Q99567 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.45□□□□□ -1.7
NUP88Q99567 AC068790.5-201ENST00000602741 355 ntBASIC4.45□□□□□ -1.7
NUP88Q99567 AC007390.2-201ENST00000606229 3803 ntBASIC4.45□□□□□ -1.7
NUP88Q99567 AC093838.1-201ENST00000613014 469 ntBASIC4.45□□□□□ -1.7
NUP88Q99567 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.45□□□□□ -1.7
NUP88Q99567 AL603758.1-201ENST00000618654 241 ntBASIC4.45□□□□□ -1.7
NUP88Q99567 AC079684.1-201ENST00000621405 437 ntBASIC4.45□□□□□ -1.7
NUP88Q99567 AC244100.1-202ENST00000621554 382 ntBASIC4.45□□□□□ -1.7
NUP88Q99567 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.45□□□□□ -1.7
NUP88Q99567 BDP1P-201ENST00000582658 1990 ntBASIC4.45□□□□□ -1.7
NUP88Q99567 AP001350.1-201ENST00000601906 1524 ntBASIC4.45□□□□□ -1.7
NUP88Q99567 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NUP88Q99567 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.45□□□□□ -1.7
NUP88Q99567 AC005832.2-201ENST00000538921 1430 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms