Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 VN1R79P-201ENST00000593540 513 ntBASIC1.49□□□□□ -2.17
CFAP54Q96N23 MIR6086-201ENST00000638065 55 ntBASIC1.49□□□□□ -2.17
CFAP54Q96N23 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CFAP54Q96N23 U3.15-201ENST00000365398 212 ntBASIC1.49□□□□□ -2.17
CFAP54Q96N23 AC092451.2-201ENST00000538746 658 ntBASIC1.49□□□□□ -2.17
CFAP54Q96N23 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.49□□□□□ -2.17
CFAP54Q96N23 FO624990.1-201ENST00000636373 85 ntBASIC1.49□□□□□ -2.17
CFAP54Q96N23 MKKS-204ENST00000639674 192 ntBASIC1.49□□□□□ -2.17
CFAP54Q96N23 AC091152.2-201ENST00000591628 2569 ntBASIC1.49□□□□□ -2.17
CFAP54Q96N23 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CFAP54Q96N23 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.48□□□□□ -2.17
CFAP54Q96N23 SNORA16.1-201ENST00000364597 132 ntBASIC1.48□□□□□ -2.17
CFAP54Q96N23 AF274854.1-201ENST00000413236 615 ntBASIC1.48□□□□□ -2.17
CFAP54Q96N23 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.48□□□□□ -2.17
CFAP54Q96N23 RPS15AP1-201ENST00000457423 391 ntBASIC1.48□□□□□ -2.17
CFAP54Q96N23 AC098799.2-201ENST00000509466 868 ntBASIC1.48□□□□□ -2.17
CFAP54Q96N23 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.48□□□□□ -2.17
CFAP54Q96N23 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.48□□□□□ -2.17
CFAP54Q96N23 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CFAP54Q96N23 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.48□□□□□ -2.17
CFAP54Q96N23 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.48□□□□□ -2.17
CFAP54Q96N23 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CFAP54Q96N23 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.48□□□□□ -2.17
CFAP54Q96N23 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CFAP54Q96N23 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CFAP54Q96N23 RPS6P15-201ENST00000431996 751 ntBASIC1.48□□□□□ -2.17
CFAP54Q96N23 RNU6-826P-201ENST00000516827 104 ntBASIC1.48□□□□□ -2.17
CFAP54Q96N23 PDCD5P1-201ENST00000543528 309 ntBASIC1.48□□□□□ -2.17
CFAP54Q96N23 AC024614.2-201ENST00000577584 372 ntBASIC1.48□□□□□ -2.17
CFAP54Q96N23 AL592494.3-201ENST00000609485 464 ntBASIC1.48□□□□□ -2.17
CFAP54Q96N23 AC007342.9-201ENST00000623877 1385 ntBASIC1.48□□□□□ -2.17
CFAP54Q96N23 ZNF271P-202ENST00000465539 1970 ntBASIC1.48□□□□□ -2.17
CFAP54Q96N23 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.48□□□□□ -2.17
CFAP54Q96N23 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.48□□□□□ -2.17
CFAP54Q96N23 OR7L1P-201ENST00000456181 380 ntBASIC1.48□□□□□ -2.17
CFAP54Q96N23 RNU6-1132P-201ENST00000459214 107 ntBASIC1.48□□□□□ -2.17
CFAP54Q96N23 AC069528.1-202ENST00000482888 637 ntBASIC1.48□□□□□ -2.17
CFAP54Q96N23 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.48□□□□□ -2.17
CFAP54Q96N23 AC036111.3-201ENST00000526389 112 ntBASIC1.48□□□□□ -2.17
CFAP54Q96N23 MIR4419B-201ENST00000577260 68 ntBASIC1.48□□□□□ -2.17
CFAP54Q96N23 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.48□□□□□ -2.17
CFAP54Q96N23 BNIP3P4-201ENST00000604946 565 ntBASIC1.48□□□□□ -2.17
CFAP54Q96N23 AL449363.1-201ENST00000617815 186 ntBASIC1.48□□□□□ -2.17
CFAP54Q96N23 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CFAP54Q96N23 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.47□□□□□ -2.17
CFAP54Q96N23 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.47□□□□□ -2.17
CFAP54Q96N23 AC090071.1-201ENST00000507713 644 ntBASIC1.47□□□□□ -2.17
CFAP54Q96N23 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.47□□□□□ -2.17
CFAP54Q96N23 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.47□□□□□ -2.17
CFAP54Q96N23 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC1.47□□□□□ -2.17
CFAP54Q96N23 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
CFAP54Q96N23 ARL5AP3-201ENST00000439327 386 ntBASIC1.47□□□□□ -2.17
CFAP54Q96N23 AL078601.1-201ENST00000444542 271 ntBASIC1.47□□□□□ -2.17
CFAP54Q96N23 TPRKBP1-201ENST00000456243 481 ntBASIC1.47□□□□□ -2.17
CFAP54Q96N23 KATNBL1P4-201ENST00000503545 918 ntBASIC1.47□□□□□ -2.17
CFAP54Q96N23 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.47□□□□□ -2.17
CFAP54Q96N23 FABP5P6-201ENST00000510588 409 ntBASIC1.47□□□□□ -2.17
CFAP54Q96N23 SUB1P4-201ENST00000566062 339 ntBASIC1.47□□□□□ -2.17
CFAP54Q96N23 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CFAP54Q96N23 ZNF209P-201ENST00000593450 2304 ntBASIC1.46□□□□□ -2.18
CFAP54Q96N23 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CFAP54Q96N23 SNORA67.6-201ENST00000391093 99 ntBASIC1.46□□□□□ -2.18
CFAP54Q96N23 USP9YP27-201ENST00000418455 438 ntBASIC1.46□□□□□ -2.18
CFAP54Q96N23 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CFAP54Q96N23 AL691517.1-201ENST00000440833 1235 ntBASIC1.46□□□□□ -2.18
CFAP54Q96N23 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC1.46□□□□□ -2.18
CFAP54Q96N23 MTCO3P44-201ENST00000510977 541 ntBASIC1.46□□□□□ -2.18
CFAP54Q96N23 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.46□□□□□ -2.18
CFAP54Q96N23 RNU6-115P-201ENST00000364310 107 ntBASIC1.46□□□□□ -2.18
CFAP54Q96N23 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.46□□□□□ -2.18
CFAP54Q96N23 TPT1P14-201ENST00000448018 505 ntBASIC1.46□□□□□ -2.18
CFAP54Q96N23 AC104986.1-201ENST00000517978 436 ntBASIC1.46□□□□□ -2.18
CFAP54Q96N23 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.46□□□□□ -2.18
CFAP54Q96N23 TRAV28-201ENST00000557548 323 ntBASIC1.46□□□□□ -2.18
CFAP54Q96N23 RPL23AP78-201ENST00000599928 470 ntBASIC1.46□□□□□ -2.18
CFAP54Q96N23 MTCO1P6-201ENST00000481192 1384 ntBASIC1.46□□□□□ -2.18
CFAP54Q96N23 U8.9-201ENST00000365667 134 ntBASIC1.46□□□□□ -2.18
CFAP54Q96N23 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.46□□□□□ -2.18
CFAP54Q96N23 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.46□□□□□ -2.18
CFAP54Q96N23 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.46□□□□□ -2.18
CFAP54Q96N23 FABP5P3-201ENST00000437960 408 ntBASIC1.46□□□□□ -2.18
CFAP54Q96N23 RSL24D1P2-201ENST00000445584 366 ntBASIC1.46□□□□□ -2.18
CFAP54Q96N23 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.46□□□□□ -2.18
CFAP54Q96N23 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.46□□□□□ -2.18
CFAP54Q96N23 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.46□□□□□ -2.18
CFAP54Q96N23 AL049779.4-201ENST00000604500 156 ntBASIC1.46□□□□□ -2.18
CFAP54Q96N23 AC012321.1-201ENST00000561622 1588 ntBASIC1.45□□□□□ -2.18
CFAP54Q96N23 MTND4P1-201ENST00000457501 1466 ntBASIC1.45□□□□□ -2.18
CFAP54Q96N23 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.45□□□□□ -2.18
CFAP54Q96N23 AC087190.1-201ENST00000484462 480 ntBASIC1.45□□□□□ -2.18
CFAP54Q96N23 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.45□□□□□ -2.18
CFAP54Q96N23 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.45□□□□□ -2.18
CFAP54Q96N23 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.45□□□□□ -2.18
CFAP54Q96N23 MIR4448-201ENST00000584360 86 ntBASIC1.45□□□□□ -2.18
CFAP54Q96N23 AC007687.1-201ENST00000602704 304 ntBASIC1.45□□□□□ -2.18
CFAP54Q96N23 AC074140.1-201ENST00000621617 208 ntBASIC1.45□□□□□ -2.18
CFAP54Q96N23 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
CFAP54Q96N23 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
CFAP54Q96N23 AL033519.2-201ENST00000403958 392 ntBASIC1.45□□□□□ -2.18
CFAP54Q96N23 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms