Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AC009951.1-201ENST00000623674 2614 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 Y_RNA.58-201ENST00000362807 102 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 Y_RNA.154-201ENST00000363624 102 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 U3.11-201ENST00000364476 212 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 RNY3P1-201ENST00000365085 102 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 RNY3-201ENST00000365484 102 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 Y_RNA.490-201ENST00000384413 102 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 SNORA70C-201ENST00000384538 135 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 SDHCP2-201ENST00000398565 501 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AL354751.2-201ENST00000415471 210 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AL645937.1-202ENST00000421799 937 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 ATP5JP1-201ENST00000431631 322 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 OR4K11P-201ENST00000431829 904 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AL365400.1-201ENST00000431854 640 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 MTATP6P16-201ENST00000434543 526 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AL049714.1-201ENST00000466686 347 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AC006512.1-201ENST00000468816 291 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AC103851.1-201ENST00000506833 274 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 PARP4P3-201ENST00000510265 317 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AC114797.1-201ENST00000514003 728 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AC105417.1-201ENST00000514691 285 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 RNU6-27P-201ENST00000516146 107 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 IGLVIV-53-201ENST00000520107 367 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AP005435.4-201ENST00000529514 284 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 OR4K8P-201ENST00000578842 1048 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 MIR4716-201ENST00000579628 84 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 COX6CP3-201ENST00000580869 223 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AC078795.3-201ENST00000602913 472 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AC010591.1-201ENST00000603941 649 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 MIR6075-201ENST00000620782 95 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 C2orf27A-204ENST00000623058 969 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 MTND4P35-201ENST00000604257 1375 ntBASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CHAMP1Q96JM3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AC018555.1-201ENST00000567548 1980 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AC107027.3-201ENST00000565095 3473 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 MIR208A-201ENST00000362287 71 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 RNA5SP175-201ENST00000364275 119 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 RNU6-1227P-201ENST00000383981 107 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 MIR514A2-201ENST00000385131 88 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 MIR514A3-201ENST00000385132 88 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 MIR454-201ENST00000390180 115 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 RNU2-62P-201ENST00000410868 191 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 RN7SKP247-201ENST00000411094 308 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 RPL30P3-201ENST00000424262 333 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 RPL23AP1-201ENST00000428990 471 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AL451050.1-201ENST00000450126 415 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 MTND3P16-201ENST00000452205 344 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AC233279.1-201ENST00000455300 423 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AC017037.2-201ENST00000513850 890 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 RN7SKP219-201ENST00000516825 296 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 RN7SKP277-201ENST00000516895 283 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 IGKV2D-36-201ENST00000518643 226 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AC022690.1-201ENST00000526681 550 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AP000827.1-201ENST00000527814 258 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AC087241.2-201ENST00000535801 324 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AL355375.2-201ENST00000574825 175 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AC069061.3-201ENST00000582254 823 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AC022432.1-201ENST00000595739 310 ntBASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.87□□□□□ -1.63
CHAMP1Q96JM3 ARF4P1-201ENST00000605447 541 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms