Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 AC100810.6-201ENST00000638068 285 ntBASIC4.47□□□□□ -1.69
CLIP3Q96DZ5 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.47□□□□□ -1.69
CLIP3Q96DZ5 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLIP3Q96DZ5 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLIP3Q96DZ5 AL672167.1-203ENST00000641299 2975 ntBASIC4.47□□□□□ -1.69
CLIP3Q96DZ5 TAB3P1-202ENST00000452645 1634 ntBASIC4.46□□□□□ -1.69
CLIP3Q96DZ5 ZNF137P-201ENST00000456718 1920 ntBASIC4.46□□□□□ -1.69
CLIP3Q96DZ5 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CLIP3Q96DZ5 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 MTND4P27-201ENST00000450813 1354 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 RNU6-173P-201ENST00000364215 104 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 RNY4P16-201ENST00000364768 94 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 AL162578.1-201ENST00000406202 378 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 RNU6-373P-201ENST00000411247 98 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 MRPL50P2-201ENST00000416821 482 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 AL645608.4-201ENST00000423619 154 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 DUTP6-201ENST00000425573 462 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 RPL7P12-201ENST00000446719 750 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 Y_RNA.632-201ENST00000459189 102 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 AC010587.1-201ENST00000505809 469 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 AC004062.1-201ENST00000509926 645 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 RNU6-1073P-201ENST00000517182 106 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 RPL23AP53-201ENST00000521854 457 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 AC009643.1-201ENST00000532030 391 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 AC023050.3-201ENST00000541142 333 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 CYCSP40-201ENST00000575927 294 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 FAM60BP-201ENST00000578364 658 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 MIR5096-201ENST00000583713 70 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 AC021646.1-201ENST00000605469 484 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 DISC2.1-201ENST00000612827 205 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 uc_338.12-201ENST00000616344 181 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 AC009248.2-201ENST00000619826 254 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 MIR6810-201ENST00000622701 70 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 AC138305.3-201ENST00000624988 240 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 AC134503.1-201ENST00000633048 54 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 MIR4275-201ENST00000636486 87 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 AC139713.2-215ENST00000641428 5037 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 DDX10P1-201ENST00000448545 1933 ntBASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP3Q96DZ5 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 SNORA31-201ENST00000362607 130 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 Y_RNA.144-201ENST00000363521 113 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 Y_RNA.184-201ENST00000363884 108 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 Y_RNA.216-201ENST00000364205 93 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 SNORA62-201ENST00000365493 153 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 RNU6-1160P-201ENST00000384546 104 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 RNA5SP397-201ENST00000391323 118 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 RNU2-62P-201ENST00000410868 191 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 RPL7AP73-201ENST00000413490 353 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 RPL35AP12-201ENST00000425362 338 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 AC119618.1-201ENST00000434191 222 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 AC090774.1-201ENST00000435925 246 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 MTND3P2-201ENST00000438452 342 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 AC093156.1-201ENST00000440382 670 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 AC016691.1-201ENST00000441321 413 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 TPT1P12-201ENST00000448968 492 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 SNORA40.12-201ENST00000516329 111 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 AC107953.1-201ENST00000522216 297 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 AP004242.1-201ENST00000533701 349 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 TOMM20P2-201ENST00000540082 421 ntBASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.45□□□□□ -1.7
CLIP3Q96DZ5 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms