Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.78□□□□□ -1.8
SKA1Q96BD8 AC103710.1-201ENST00000610003 901 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 AL592295.2-201ENST00000612578 206 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 AC009159.2-201ENST00000617603 606 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 AC073530.2-201ENST00000623987 261 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SKA1Q96BD8 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SKA1Q96BD8 MAPK10-362ENST00000641864 4484 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
SKA1Q96BD8 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SKA1Q96BD8 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.78□□□□□ -1.81
SKA1Q96BD8 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SKA1Q96BD8 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SKA1Q96BD8 MAPK10-322ENST00000641485 4530 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
SKA1Q96BD8 RNU1-39P-201ENST00000383897 165 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 MIR19A-201ENST00000384878 82 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 MIR184-201ENST00000384962 84 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 RN7SKP140-201ENST00000411196 284 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 RPL23AP69-201ENST00000431134 458 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 LARP1BP3-201ENST00000437229 869 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 FTH1P1-201ENST00000437933 532 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 ELOCP30-201ENST00000447108 299 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 SNRPGP6-201ENST00000451124 220 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.77□□□□□ -1.81
SKA1Q96BD8 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.77□□□□□ -1.81
SKA1Q96BD8 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.77□□□□□ -1.81
SKA1Q96BD8 AC092798.1-201ENST00000458542 409 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.77□□□□□ -1.81
SKA1Q96BD8 OR5BM1P-201ENST00000512021 366 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 RNU6-390P-201ENST00000516259 103 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SKA1Q96BD8 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.77□□□□□ -1.81
SKA1Q96BD8 HIGD1AP1-201ENST00000550979 275 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.77□□□□□ -1.81
SKA1Q96BD8 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.77□□□□□ -1.81
SKA1Q96BD8 HMGB1P6-201ENST00000569046 646 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 AC005951.2-201ENST00000576282 495 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.77□□□□□ -1.81
SKA1Q96BD8 AC002545.1-201ENST00000592511 181 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.77□□□□□ -1.81
SKA1Q96BD8 AL137849.1-201ENST00000604767 169 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 AC017037.3-201ENST00000625016 472 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.77□□□□□ -1.81
SKA1Q96BD8 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SKA1Q96BD8 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SKA1Q96BD8 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SKA1Q96BD8 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.77□□□□□ -1.81
SKA1Q96BD8 AC022336.2-201ENST00000568966 2538 ntBASIC3.77□□□□□ -1.81
SKA1Q96BD8 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SKA1Q96BD8 MTCO1P12-201ENST00000414273 1543 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.76□□□□□ -1.81
SKA1Q96BD8 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SKA1Q96BD8 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SKA1Q96BD8 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SKA1Q96BD8 MIR483-201ENST00000385070 76 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 MIR325-201ENST00000385260 98 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SKA1Q96BD8 U8.14-201ENST00000390843 143 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 RNU6-278P-201ENST00000390945 109 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 AL513331.1-201ENST00000411908 397 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 RPL21P24-201ENST00000413752 448 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 AC093578.1-201ENST00000415219 368 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.76□□□□□ -1.81
SKA1Q96BD8 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.76□□□□□ -1.81
SKA1Q96BD8 RPS27AP14-201ENST00000422868 454 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.76□□□□□ -1.81
SKA1Q96BD8 RPL23AP82-202ENST00000427528 469 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 USP12PX-201ENST00000432383 1057 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.76□□□□□ -1.81
SKA1Q96BD8 CYCSP35-201ENST00000451978 304 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 SETP11-201ENST00000473027 690 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 AC055855.1-201ENST00000489563 579 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SKA1Q96BD8 OR2A20P-203ENST00000498397 1268 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.76□□□□□ -1.81
SKA1Q96BD8 NRON-201ENST00000517270 370 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.76□□□□□ -1.81
SKA1Q96BD8 ATP5F1P5-201ENST00000526403 760 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 AP002748.2-201ENST00000528671 348 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.76□□□□□ -1.81
SKA1Q96BD8 DNAJC8P1-201ENST00000554535 372 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 GLUD1P4-201ENST00000590914 418 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 AC007179.3-201ENST00000604976 235 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 AC140725.3-201ENST00000616193 880 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.76□□□□□ -1.81
SKA1Q96BD8 AP000770.2-201ENST00000623694 100 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.76□□□□□ -1.81
SKA1Q96BD8 AC097655.1-201ENST00000635075 318 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.76□□□□□ -1.81
SKA1Q96BD8 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.76□□□□□ -1.81
SKA1Q96BD8 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SKA1Q96BD8 MTND5P1-201ENST00000445440 1375 ntBASIC3.76□□□□□ -1.81
SKA1Q96BD8 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SKA1Q96BD8 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
SKA1Q96BD8 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.75□□□□□ -1.81
SKA1Q96BD8 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SKA1Q96BD8 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms