Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS33AQ96AX1 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 RNU6-500P-201ENST00000362349 107 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 SNORD9-201ENST00000362566 104 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 RNU6-660P-201ENST00000364566 109 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 RNU1-39P-201ENST00000383897 165 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 TAS2R15P-201ENST00000390674 928 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 RNU6-628P-201ENST00000410675 107 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 RN7SKP140-201ENST00000411196 284 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AL513331.1-201ENST00000411908 397 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AC245291.1-201ENST00000419501 328 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AL451054.2-201ENST00000420896 202 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 RPS27AP14-201ENST00000422868 454 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AC109583.1-201ENST00000432156 268 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AC010099.1-201ENST00000455434 375 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AC008481.1-201ENST00000463278 396 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AC068724.1-201ENST00000487100 792 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AC055855.1-201ENST00000489563 579 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AC107934.2-201ENST00000518653 310 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AC068657.1-201ENST00000520807 306 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AC007954.1-201ENST00000554198 494 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 MIR4286-201ENST00000580651 93 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AC063944.3-201ENST00000609969 533 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AC131159.1-201ENST00000621854 213 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AP002791.1-201ENST00000623291 381 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AC017037.3-201ENST00000625016 472 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AC097655.1-201ENST00000635075 318 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 MFSD8-233ENST00000641482 4860 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 AC091564.4-201ENST00000533934 2194 ntBASIC3.31□□□□□ -1.88
VPS33AQ96AX1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS33AQ96AX1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.3□□□□□ -1.88
VPS33AQ96AX1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS33AQ96AX1 RNA5SP383-201ENST00000362934 120 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 RNA5SP51-201ENST00000364750 119 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS33AQ96AX1 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
VPS33AQ96AX1 U8.14-201ENST00000390843 143 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 AC025750.1-201ENST00000399891 379 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 Z85995.1-201ENST00000415547 335 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 AL593851.1-201ENST00000426171 157 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 RPL23AP82-202ENST00000427528 469 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 USP12PX-201ENST00000432383 1057 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 RPL23AP22-201ENST00000437556 453 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 Z82210.1-201ENST00000440037 231 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 BMI1P1-201ENST00000445879 941 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 ELOCP30-201ENST00000447108 299 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS33AQ96AX1 CENPBD1P1-201ENST00000464061 469 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 AL135752.1-201ENST00000479477 471 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS33AQ96AX1 RNA5SP291-201ENST00000517222 105 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS33AQ96AX1 AP002748.2-201ENST00000528671 348 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.3□□□□□ -1.88
VPS33AQ96AX1 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
VPS33AQ96AX1 ZNF321P-202ENST00000550843 495 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 TRAV28-201ENST00000557548 323 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS33AQ96AX1 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
VPS33AQ96AX1 AP000403.1-201ENST00000603349 851 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 PRELID3BP8-201ENST00000604148 295 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 AC087683.2-201ENST00000611384 326 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.3□□□□□ -1.88
VPS33AQ96AX1 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.3□□□□□ -1.88
VPS33AQ96AX1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
VPS33AQ96AX1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VPS33AQ96AX1 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VPS33AQ96AX1 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VPS33AQ96AX1 RNU6-1035P-201ENST00000384477 107 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
VPS33AQ96AX1 RNU2-33P-201ENST00000410344 192 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.29□□□□□ -1.88
VPS33AQ96AX1 AL356968.1-201ENST00000416622 474 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 USP9YP26-201ENST00000421008 661 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS33AQ96AX1 SNRPGP6-201ENST00000451124 220 ntBASIC3.29□□□□□ -1.88
VPS33AQ96AX1 NUTF2P7-201ENST00000453086 375 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms