Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AL008629.1-201ENST00000438615 184 ntBASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 AC106872.3-201ENST00000495104 446 ntBASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 LTV1P1-201ENST00000510683 1237 ntBASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 AL359273.1-201ENST00000510918 627 ntBASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 SNORA31.1-201ENST00000515993 133 ntBASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 RN7SKP18-201ENST00000516005 275 ntBASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 SNORA31.5-201ENST00000516190 133 ntBASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 AC013828.2-201ENST00000532487 235 ntBASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 AC074050.1-201ENST00000563247 211 ntBASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 BNIP3P33-201ENST00000598912 569 ntBASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 AL357094.1-201ENST00000603845 844 ntBASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 PCMTD1P7-201ENST00000634506 357 ntBASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 OR8B1P-202ENST00000641132 1178 ntBASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 AC012321.1-201ENST00000561622 1588 ntBASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.19□□□□□ -1.9
CKAP2Q8WWK9 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 MTND4P16-201ENST00000466108 1367 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 RNU6-637P-201ENST00000384050 107 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 RNU1-101P-201ENST00000391171 127 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 AL590084.2-201ENST00000401481 382 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 AL354719.1-201ENST00000406535 843 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 AL389915.1-201ENST00000422463 466 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 USP9YP36-201ENST00000424581 829 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 AL445669.1-201ENST00000426743 755 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 RSU1P2-202ENST00000437884 485 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 AC108734.1-201ENST00000439549 399 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 AL049714.1-201ENST00000466686 347 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 AC034222.1-201ENST00000494052 532 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 SNORA31.22-201ENST00000517204 135 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 AC026403.1-201ENST00000518938 295 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 MIR544B-201ENST00000582372 78 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 VN1R90P-201ENST00000595717 726 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 AC021171.1-201ENST00000603137 706 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 AC008739.3-201ENST00000603262 127 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 AC009570.1-201ENST00000609599 745 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 AL031667.3-201ENST00000620124 655 ntBASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.18□□□□□ -1.9
CKAP2Q8WWK9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 RNU5E-8P-201ENST00000363502 116 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 Y_RNA.302-201ENST00000364997 102 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 MIR449B-201ENST00000384995 97 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 U3.20-201ENST00000390909 217 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 RNU6-516P-201ENST00000411381 104 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 HMGB1P11-201ENST00000413899 637 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 AC011233.1-201ENST00000422812 283 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 PPP1R11P2-201ENST00000423543 382 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 AC093151.1-201ENST00000427711 313 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 UBE2FP3-201ENST00000436366 524 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 MTCYBP3-201ENST00000445588 1137 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 AL606662.1-201ENST00000445763 553 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 AP004217.1-201ENST00000480579 346 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 APOOP4-201ENST00000513530 597 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 RNU6-798P-201ENST00000516912 103 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 ZNF321P-202ENST00000550843 495 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 GTF2IP22-201ENST00000554443 182 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 AC009094.1-201ENST00000564443 426 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 AC060771.1-201ENST00000582031 164 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 ZNF415P1-201ENST00000582279 1166 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 AC012119.1-201ENST00000603184 222 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 AP000811.1-201ENST00000603803 651 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 AC018714.1-201ENST00000605028 208 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 AC140725.3-201ENST00000616193 880 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 MIR6076-201ENST00000617521 113 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms