Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 SLC31A1P1-201ENST00000451221 567 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 BTF3P5-201ENST00000457252 467 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 U8.18-201ENST00000459285 133 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 RN7SL585P-201ENST00000470538 280 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 FTH1P24-201ENST00000503502 462 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 AC006390.1-201ENST00000508068 283 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 AC048346.1-201ENST00000510247 144 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 AC017037.2-201ENST00000513850 890 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 RN7SKP82-201ENST00000516786 223 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 SCARNA14-201ENST00000516903 136 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 AC087369.1-201ENST00000520775 996 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 CYP4A43P-201ENST00000568156 121 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 AL512605.2-201ENST00000592972 256 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 CKS1BP3-201ENST00000600888 237 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 MIR7154-201ENST00000620673 73 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 AC119674.1-207ENST00000641355 633 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 AP002907.1-201ENST00000606361 1430 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 MTCO1P14-201ENST00000441695 1559 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 MTND4P1-201ENST00000457501 1466 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 GNG5P1-201ENST00000255500 204 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 RNU6-582P-201ENST00000362989 107 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 Y_RNA.193-201ENST00000363979 102 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 Y_RNA.259-201ENST00000364619 101 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 SNORA69-201ENST00000383895 132 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 Y_RNA.387-201ENST00000383918 102 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 SNORD116-23-201ENST00000384645 92 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 MIR670-201ENST00000390142 98 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 RNU6-373P-201ENST00000411247 98 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 RAB9AP3-201ENST00000412737 573 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 AC114814.2-201ENST00000419195 485 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 PPIAP17-201ENST00000438507 471 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 HMGB1P18-201ENST00000438801 619 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 Z98949.2-201ENST00000440996 144 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 RPL23AP16-201ENST00000441715 421 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 NOTCH2P1-201ENST00000443481 624 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 RAB9AP1-201ENST00000449393 573 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 AC027575.1-201ENST00000481064 460 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 PPBPP1-201ENST00000510807 373 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 AC005741.1-201ENST00000511094 432 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 PTP4A1P4-201ENST00000512479 322 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 MTND5P4-201ENST00000514978 288 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 RNU6-1170P-201ENST00000515974 106 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 RNA5SP216-201ENST00000516111 123 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 AC087241.2-201ENST00000535801 324 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 AC087499.8-201ENST00000578406 226 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 MIR3149-201ENST00000584629 83 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 AC104662.1-201ENST00000604448 511 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 DISC2.1-201ENST00000612827 205 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 AC090617.10-201ENST00000624308 134 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 LINC00561-201ENST00000565815 2738 ntBASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.7□□□□□ -1.66
SH3RF3Q8TEJ3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 SNORA22B-201ENST00000383876 138 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 Y_RNA.384-201ENST00000383909 102 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 Y_RNA.452-201ENST00000384202 108 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 AL603908.1-201ENST00000406098 201 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 RNU2-47P-201ENST00000410649 186 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 RNU2-6P-201ENST00000411404 190 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 AL606489.2-201ENST00000433886 234 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms