Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 RPS20P15-201ENST00000412792 311 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 AL139396.1-201ENST00000421137 167 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 AL163193.1-201ENST00000444895 788 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 AL360271.2-201ENST00000447710 161 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 AC118758.1-202ENST00000454719 225 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 AC092754.1-201ENST00000472975 479 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 RPL32P33-201ENST00000487023 394 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 TBCAP3-201ENST00000512475 312 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 RNU6-1069P-201ENST00000516612 133 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 RNA5SP441-201ENST00000516809 88 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 AC021678.3-201ENST00000517893 476 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 AC116917.1-201ENST00000520558 305 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 AC087477.6-201ENST00000559595 843 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 MIR3942-201ENST00000585264 109 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 DUSP12P1-201ENST00000612874 516 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 AL512624.1-201ENST00000613638 469 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 AL512652.1-201ENST00000619006 500 ntBASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLRN3Q8NCR9 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
CLRN3Q8NCR9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AL049641.1-201ENST00000441055 1948 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AC007685.1-201ENST00000329806 452 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 RNU6-1252P-201ENST00000363054 104 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 Y_RNA.212-201ENST00000364177 102 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 RNU4-76P-201ENST00000364509 141 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 Y_RNA.384-201ENST00000383909 102 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 MIR450B-201ENST00000401182 78 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 RPL21P109-201ENST00000422213 475 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AC079168.1-201ENST00000458741 345 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 RPS23P3-201ENST00000470993 430 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AC104164.2-201ENST00000496953 495 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AC009901.1-201ENST00000506703 541 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 RPL39P5-202ENST00000512505 151 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 FTH1P9-201ENST00000513251 355 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 RNU6-1282P-201ENST00000516735 96 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AC100770.1-201ENST00000532310 322 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AL355375.2-201ENST00000574825 175 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 LRRC37A5P-203ENST00000580181 585 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AL359091.2-201ENST00000609303 556 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AL121757.2-201ENST00000611223 313 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 uc_338.29-201ENST00000615099 168 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AL118522.2-201ENST00000616045 615 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AL591926.1-201ENST00000620542 217 ntBASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms