Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC139792.3-201ENST00000623525 224 ntBASIC4.6□□□□□ -1.67
SYNE4Q8N205 FRG1KP-201ENST00000623592 341 ntBASIC4.6□□□□□ -1.67
SYNE4Q8N205 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.6□□□□□ -1.67
SYNE4Q8N205 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SYNE4Q8N205 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.6□□□□□ -1.67
SYNE4Q8N205 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SYNE4Q8N205 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.6□□□□□ -1.67
SYNE4Q8N205 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SYNE4Q8N205 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SYNE4Q8N205 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SYNE4Q8N205 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE4Q8N205 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE4Q8N205 FRG1BP-201ENST00000278882 761 ntBASIC4.59□□□□□ -1.67
SYNE4Q8N205 AC007685.1-201ENST00000329806 452 ntBASIC4.59□□□□□ -1.67
SYNE4Q8N205 FRG1CP-201ENST00000358464 769 ntBASIC4.59□□□□□ -1.67
SYNE4Q8N205 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE4Q8N205 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE4Q8N205 Y_RNA.86-201ENST00000363020 111 ntBASIC4.59□□□□□ -1.67
SYNE4Q8N205 RNU6-1085P-201ENST00000363576 107 ntBASIC4.59□□□□□ -1.67
SYNE4Q8N205 Y_RNA.159-201ENST00000363674 87 ntBASIC4.59□□□□□ -1.67
SYNE4Q8N205 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SYNE4Q8N205 AC068050.1-201ENST00000394891 380 ntBASIC4.59□□□□□ -1.67
SYNE4Q8N205 RNU6-908P-201ENST00000410160 94 ntBASIC4.59□□□□□ -1.67
SYNE4Q8N205 RNA5SP120-201ENST00000410900 112 ntBASIC4.59□□□□□ -1.67
SYNE4Q8N205 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.59□□□□□ -1.67
SYNE4Q8N205 BX842559.1-201ENST00000419615 532 ntBASIC4.59□□□□□ -1.67
SYNE4Q8N205 AL365440.1-201ENST00000436135 2167 ntBASIC4.59□□□□□ -1.67
SYNE4Q8N205 AL118496.1-201ENST00000440201 1812 ntBASIC4.59□□□□□ -1.67
SYNE4Q8N205 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.59□□□□□ -1.67
SYNE4Q8N205 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.59□□□□□ -1.67
SYNE4Q8N205 RPS20P24-201ENST00000457473 361 ntBASIC4.59□□□□□ -1.67
SYNE4Q8N205 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.59□□□□□ -1.67
SYNE4Q8N205 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.59□□□□□ -1.67
SYNE4Q8N205 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE4Q8N205 AC117522.3-201ENST00000507974 584 ntBASIC4.59□□□□□ -1.67
SYNE4Q8N205 AC026784.1-201ENST00000507986 352 ntBASIC4.59□□□□□ -1.67
SYNE4Q8N205 AC006390.1-201ENST00000508068 283 ntBASIC4.59□□□□□ -1.67
SYNE4Q8N205 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.59□□□□□ -1.67
SYNE4Q8N205 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.59□□□□□ -1.67
SYNE4Q8N205 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.59□□□□□ -1.67
SYNE4Q8N205 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.59□□□□□ -1.67
SYNE4Q8N205 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE4Q8N205 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.59□□□□□ -1.67
SYNE4Q8N205 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.59□□□□□ -1.67
SYNE4Q8N205 HIF1AP1-201ENST00000553642 175 ntBASIC4.59□□□□□ -1.67
SYNE4Q8N205 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.59□□□□□ -1.67
SYNE4Q8N205 NCAPGP2-201ENST00000557911 754 ntBASIC4.59□□□□□ -1.67
SYNE4Q8N205 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.59□□□□□ -1.67
SYNE4Q8N205 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.59□□□□□ -1.67
SYNE4Q8N205 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.59□□□□□ -1.67
SYNE4Q8N205 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.59□□□□□ -1.67
SYNE4Q8N205 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.59□□□□□ -1.67
SYNE4Q8N205 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE4Q8N205 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.68
SYNE4Q8N205 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.59□□□□□ -1.68
SYNE4Q8N205 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SYNE4Q8N205 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 OR52B1P-201ENST00000316506 909 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 RNU1-108P-201ENST00000362556 161 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 SNORD56.2-201ENST00000363242 71 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 RNA5SP424-201ENST00000390988 115 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 RN7SKP285-201ENST00000410137 318 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 RNA5SP306-201ENST00000411087 107 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 AC073264.1-201ENST00000411508 416 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 AL354751.2-201ENST00000415471 210 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 AC007390.1-201ENST00000415722 356 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 CYCSP4-201ENST00000429682 331 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 ATP5JP1-201ENST00000431631 322 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 RPL23AP16-201ENST00000441715 421 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 RNU7-136P-201ENST00000458819 69 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 AP000893.1-201ENST00000474462 794 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 AC025518.1-201ENST00000479856 347 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 TRBV12-2-201ENST00000489763 344 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 RNU6-1281P-201ENST00000516223 105 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 Y_RNA.672-201ENST00000516289 104 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SYNE4Q8N205 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 AC068587.4-201ENST00000533893 186 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 ARL2BPP2-201ENST00000550907 489 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 AC125611.2-201ENST00000551907 647 ntBASIC4.58□□□□□ -1.68
SYNE4Q8N205 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 AC010680.3-201ENST00000604215 520 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms