Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AL391156.1-201ENST00000554965 554 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AC099489.2-201ENST00000574976 260 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 MIR4528-201ENST00000577763 90 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS52Q8N1B4 MIR5195-201ENST00000583555 115 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 UBE2L4-201ENST00000587688 464 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 SEPT7P9-203ENST00000604116 343 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AL160281.1-201ENST00000605307 311 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AC109347.2-201ENST00000610220 349 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AC087241.4-201ENST00000612441 480 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 Z99129.1-201ENST00000612510 255 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.97□□□□□ -1.77
VPS52Q8N1B4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AC015540.1-201ENST00000615828 501 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AL158801.5-201ENST00000623123 465 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
VPS52Q8N1B4 MTND5P29-201ENST00000458676 1807 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.77
VPS52Q8N1B4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.77
VPS52Q8N1B4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 RNA5SP295-201ENST00000362655 121 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 RNU6-263P-201ENST00000363811 107 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AL359704.1-201ENST00000411586 781 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 USP9YP13-201ENST00000417797 480 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 MTCYBP1-201ENST00000454315 1119 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AC007967.1-201ENST00000455422 1159 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AL136097.1-201ENST00000456945 913 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 MTND2P33-201ENST00000506452 1031 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AC021146.1-201ENST00000511202 716 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 RNU6-720P-201ENST00000516363 108 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AP003467.2-201ENST00000520175 319 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 MTCYBP20-201ENST00000524239 1129 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 OR4R3P-201ENST00000525084 838 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AP002453.2-201ENST00000533503 320 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AC037471.2-201ENST00000564941 598 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AC009977.1-201ENST00000586015 570 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AC080078.2-201ENST00000603766 501 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 IGHV3-29-201ENST00000604817 344 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AL034351.1-201ENST00000605288 668 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AL589743.7-201ENST00000612637 233 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AC138932.5-201ENST00000617759 563 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AC079684.1-201ENST00000621405 437 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AC138915.3-201ENST00000562908 1389 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AC005183.1-201ENST00000603687 1979 ntBASIC3.96□□□□□ -1.78
VPS52Q8N1B4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS52Q8N1B4 AC032011.1-201ENST00000611703 1549 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 FRG1BP-201ENST00000278882 761 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 SNORD9-201ENST00000362566 104 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 RNU6-97P-201ENST00000363387 104 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 MIR490-201ENST00000384865 128 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 MIR607-201ENST00000385241 96 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 RNU6-192P-201ENST00000391253 100 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 MTHFD2P2-201ENST00000407725 247 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 AIMP1P1-201ENST00000418670 937 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 RPL21P112-201ENST00000434403 463 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 MTND1P34-201ENST00000438556 671 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 MTND1P27-201ENST00000451117 902 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 snoU109.1-201ENST00000459339 135 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS52Q8N1B4 AC011825.1-201ENST00000484967 388 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 AC006390.1-201ENST00000508068 283 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 CDC42P4-201ENST00000510507 563 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 RNA5SP208-201ENST00000516156 78 ntBASIC3.95□□□□□ -1.78
VPS52Q8N1B4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms