Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 RN7SKP104-201ENST00000362605 328 ntBASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 U3.10-201ENST00000364459 214 ntBASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 AL445433.1-201ENST00000457507 257 ntBASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 AC022034.3-201ENST00000471393 478 ntBASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 AC083982.1-201ENST00000485679 344 ntBASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 AC004980.4-201ENST00000513375 203 ntBASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 FAM60BP-201ENST00000578364 658 ntBASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 RNU6-85P-201ENST00000605989 107 ntBASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 AL022394.1-201ENST00000606979 292 ntBASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 AC091953.3-201ENST00000623220 236 ntBASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 CYP3A51P-201ENST00000633513 256 ntBASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
NPAS3Q8IXF0 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 AC006600.2-201ENST00000624834 2506 ntBASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 AC015799.1-201ENST00000622996 3122 ntBASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 RNU4-90P-201ENST00000362773 141 ntBASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 RNU6-946P-201ENST00000383878 107 ntBASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 PTGES3P4-201ENST00000426243 356 ntBASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 SNORD97-201ENST00000459187 142 ntBASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 AL139099.1-201ENST00000497398 403 ntBASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 AC122688.1-201ENST00000541494 223 ntBASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 MIR3934-201ENST00000579806 107 ntBASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 AP000769.2-201ENST00000602344 396 ntBASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 AC012119.1-201ENST00000603184 222 ntBASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 FP236240.3-201ENST00000623061 327 ntBASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS3Q8IXF0 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 HSPA8P4-201ENST00000511877 1920 ntBASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 U3.13-201ENST00000364804 214 ntBASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 SNORA51.8-201ENST00000384234 132 ntBASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 RNU6-429P-201ENST00000384582 108 ntBASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 MIR105-1-201ENST00000385222 81 ntBASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 RNU11-201ENST00000387069 134 ntBASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 AL049745.1-201ENST00000433953 286 ntBASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 AZGP1P2-201ENST00000454506 345 ntBASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 PLGLA-201ENST00000465668 449 ntBASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 AC092754.1-201ENST00000472975 479 ntBASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 SNRPCP3-201ENST00000474888 476 ntBASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 RPL23AP65-201ENST00000475608 468 ntBASIC5.56□□□□□ -1.52
NPAS3Q8IXF0 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms