Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CCDC71Q8IV32 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC71Q8IV32 RN7SKP266-201ENST00000410232 287 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 RNA5SP229-201ENST00000410809 99 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 RPS15AP38-201ENST00000413110 372 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 AC234781.2-201ENST00000426370 994 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 UBE2FP3-201ENST00000436366 524 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC71Q8IV32 AC006028.1-201ENST00000438379 402 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC71Q8IV32 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC71Q8IV32 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC71Q8IV32 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC71Q8IV32 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC71Q8IV32 PAXBP1P1-201ENST00000449315 447 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 ART2BP-201ENST00000453501 499 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 AL049873.1-201ENST00000480540 376 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 RPS4XP13-201ENST00000483219 789 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 AC108860.1-201ENST00000484521 383 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC71Q8IV32 FCF1P8-201ENST00000510322 597 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.03□□□□□ -1.92
CCDC71Q8IV32 RNA5SP385-201ENST00000515947 110 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 SNORA31.20-201ENST00000517111 133 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 AC087276.1-201ENST00000529659 480 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 AC109635.4-202ENST00000531666 412 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC71Q8IV32 AC087481.2-201ENST00000565492 330 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC71Q8IV32 MIR4474-201ENST00000579189 78 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC71Q8IV32 AL356596.1-201ENST00000624230 379 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 SCARNA15.3-201ENST00000626315 122 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 SCARNA4.1-201ENST00000628597 123 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC71Q8IV32 CRYM-AS1-204ENST00000637983 556 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC71Q8IV32 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC71Q8IV32 AL353743.1-202ENST00000431724 1695 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 CR383658.2-201ENST00000547576 1525 ntBASIC3.03□□□□□ -1.92
CCDC71Q8IV32 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AC110774.1-201ENST00000623567 2018 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 Z83843.1-201ENST00000604070 3685 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 RNU6-289P-201ENST00000364093 107 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 Y_RNA.302-201ENST00000364997 102 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 RNU6-359P-201ENST00000365466 108 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 RNU6-1181P-201ENST00000384191 106 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AL122016.1-201ENST00000403365 367 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 MIR320C1-201ENST00000408566 88 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 RNU4-72P-201ENST00000410754 173 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 NDUFB4P5-201ENST00000415445 361 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 RPL23AP39-201ENST00000415533 405 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AL365203.2-201ENST00000423444 196 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 OR2AS1P-201ENST00000427827 319 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 UBE2D3P1-201ENST00000436669 444 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 HMGN2P20-201ENST00000437531 273 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AL133217.1-201ENST00000450980 425 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 Z82190.1-201ENST00000454534 490 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AC010285.1-201ENST00000470580 392 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AC021678.1-201ENST00000505195 936 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AC112198.1-201ENST00000505369 1220 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 CR383656.7-201ENST00000548164 174 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AC006557.5-201ENST00000603126 811 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AC079248.2-201ENST00000623779 326 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AC007671.2-201ENST00000637344 619 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AC099063.3-201ENST00000642066 185 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AP001350.1-201ENST00000601906 1524 ntBASIC3.02□□□□□ -1.93
CCDC71Q8IV32 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CCDC71Q8IV32 AC092447.10-201ENST00000620607 1652 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 RNU6-777P-201ENST00000364265 104 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 Y_RNA.234-201ENST00000364409 97 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 SNORA51.2-201ENST00000364595 132 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 SAR1AP2-201ENST00000392696 594 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms