Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 RNU6-1249P-201ENST00000363237 111 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 RNU6-97P-201ENST00000363387 104 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 RNU6-1155P-201ENST00000363554 107 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 RNU6-712P-201ENST00000410558 100 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 MTCO2P34-201ENST00000421994 607 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AL356583.2-201ENST00000426536 280 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 BX890604.2-201ENST00000427883 474 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 HMGN2P31-201ENST00000432430 273 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 MTND4LP10-201ENST00000435146 291 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 RPS24P1-201ENST00000438550 371 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 PGBD4P3-201ENST00000440731 581 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AC239367.2-201ENST00000447309 705 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 PDSS1P2-201ENST00000449397 678 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 ST13P14-201ENST00000474095 734 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AC025518.1-201ENST00000479856 347 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AC020893.1-201ENST00000502452 580 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AC112204.1-201ENST00000502591 103 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 ARL2BPP4-201ENST00000506854 471 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 ARL2BPP6-201ENST00000512757 439 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 RNU6-1095P-201ENST00000516148 108 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 RN7SKP60-201ENST00000516985 239 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AC112191.3-201ENST00000604371 277 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AC012557.2-201ENST00000605919 418 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AC011816.2-201ENST00000607089 556 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AL592295.2-201ENST00000612578 206 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AL357559.1-201ENST00000622228 274 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AC110801.1-201ENST00000623590 212 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AC048347.1-201ENST00000624621 427 ntBASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SYNE3Q6ZMZ3 AL513302.2-201ENST00000562313 1842 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 FRG1BP-201ENST00000278882 761 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 Y_RNA.46-201ENST00000362695 102 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 RNU6-335P-201ENST00000364563 113 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 RNU6-533P-201ENST00000384144 107 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 MIR184-201ENST00000384962 84 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 U3.20-201ENST00000390909 217 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 RPS20P2-201ENST00000402520 389 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 RNU6-248P-201ENST00000410720 107 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 RNU4-78P-201ENST00000410940 126 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 HMGN1P14-201ENST00000412459 517 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 ATP5JP1-201ENST00000431631 322 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 AL031667.1-201ENST00000440222 725 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 HMGB3P8-201ENST00000449709 577 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 RBMY2UP-201ENST00000453474 324 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 AP002812.1-201ENST00000495378 474 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 SETP2-201ENST00000553886 926 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 ZNF519P3-201ENST00000557158 1032 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 AC006362.1-201ENST00000567392 174 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 AC012669.1-201ENST00000603209 283 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 AC092354.2-201ENST00000607786 514 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 AL353748.2-201ENST00000622148 471 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 AL392088.2-201ENST00000637607 285 ntBASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SYNE3Q6ZMZ3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms