Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.23□□□□□ -2.05
CCDC171Q6TFL3 CENPCP1-201ENST00000533085 2578 ntBASIC2.23□□□□□ -2.05
CCDC171Q6TFL3 RNU6-1293P-201ENST00000384077 107 ntBASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 AL445685.2-201ENST00000422551 342 ntBASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 AC104058.1-201ENST00000448028 297 ntBASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 snoU13.7-201ENST00000459220 104 ntBASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 RPS29P11-201ENST00000496507 171 ntBASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 AC096571.1-202ENST00000506634 735 ntBASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 RNU6-1004P-201ENST00000516584 111 ntBASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 SNORA31.20-201ENST00000517111 133 ntBASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 AC011494.1-201ENST00000596454 237 ntBASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 AC068790.3-201ENST00000602988 553 ntBASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 AL356280.1-201ENST00000603614 379 ntBASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 AC093673.2-201ENST00000609674 331 ntBASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 RNU6-156P-201ENST00000621869 107 ntBASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 AC012640.5-201ENST00000623897 319 ntBASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC171Q6TFL3 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 MIR9-3-201ENST00000385084 90 ntBASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 AP002784.2-201ENST00000397300 549 ntBASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 AL030996.1-201ENST00000411430 235 ntBASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 AL512504.1-201ENST00000415494 778 ntBASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 AL451074.3-201ENST00000437709 472 ntBASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 HMGB1P26-201ENST00000452520 628 ntBASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 AL135752.1-201ENST00000479477 471 ntBASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 AC117522.2-201ENST00000510049 657 ntBASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 AC068339.2-201ENST00000534395 618 ntBASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 MIR548Y-201ENST00000582739 110 ntBASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 RPAP2P1-201ENST00000603626 1168 ntBASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 AL022099.1-201ENST00000604551 712 ntBASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 AL138880.2-201ENST00000616214 239 ntBASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 MIR6076-201ENST00000617521 113 ntBASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 AC068722.2-201ENST00000618734 544 ntBASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
CCDC171Q6TFL3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 MTCO3P4-201ENST00000419236 787 ntBASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 OR6C72P-201ENST00000451403 892 ntBASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 HMGN2P23-201ENST00000456759 269 ntBASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 KLRA1P-201ENST00000503499 986 ntBASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 RPP40P2-201ENST00000603596 712 ntBASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 AL136363.1-201ENST00000605349 337 ntBASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 AC018755.4-201ENST00000619715 454 ntBASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 AC099063.3-201ENST00000642066 185 ntBASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 ZNF72P-201ENST00000425869 1908 ntBASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC171Q6TFL3 SNORA16.1-201ENST00000364597 132 ntBASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 RNU6-185P-201ENST00000384421 107 ntBASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 RNA5SP252-201ENST00000391131 119 ntBASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 SNORA26.9-201ENST00000391322 122 ntBASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 UBE2FP3-201ENST00000436366 524 ntBASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 RPL7P54-201ENST00000438336 674 ntBASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 MTCYBP12-201ENST00000440559 1134 ntBASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 snoU13.4-201ENST00000458916 104 ntBASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 snoU13.3-201ENST00000459441 104 ntBASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 FAM172BP-201ENST00000487497 1089 ntBASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 AC004062.1-201ENST00000509926 645 ntBASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 RNA5SP182-201ENST00000516064 82 ntBASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 RNU6-1308P-201ENST00000516817 103 ntBASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 HMGB1P46-201ENST00000520062 610 ntBASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 AK6P1-201ENST00000540219 478 ntBASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms