Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AL109933.2-201ENST00000452651 260 ntBASIC2.57□□□□□ -2
H3F3CQ6NXT2 USP9YP34-201ENST00000453983 808 ntBASIC2.57□□□□□ -2
H3F3CQ6NXT2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.57□□□□□ -2
H3F3CQ6NXT2 RPL31P50-201ENST00000471002 296 ntBASIC2.57□□□□□ -2
H3F3CQ6NXT2 OR4G11P-201ENST00000492842 939 ntBASIC2.57□□□□□ -2
H3F3CQ6NXT2 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.57□□□□□ -2
H3F3CQ6NXT2 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.57□□□□□ -2
H3F3CQ6NXT2 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.57□□□□□ -2
H3F3CQ6NXT2 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.57□□□□□ -2
H3F3CQ6NXT2 AC092451.2-201ENST00000538746 658 ntBASIC2.57□□□□□ -2
H3F3CQ6NXT2 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.57□□□□□ -2
H3F3CQ6NXT2 AC090888.1-201ENST00000561335 1141 ntBASIC2.57□□□□□ -2
H3F3CQ6NXT2 VN1R90P-201ENST00000595717 726 ntBASIC2.57□□□□□ -2
H3F3CQ6NXT2 AL445435.1-201ENST00000604232 665 ntBASIC2.57□□□□□ -2
H3F3CQ6NXT2 OR2AS2P-201ENST00000606902 342 ntBASIC2.57□□□□□ -2
H3F3CQ6NXT2 AP001521.1-201ENST00000609150 300 ntBASIC2.57□□□□□ -2
H3F3CQ6NXT2 AC004852.3-201ENST00000614131 326 ntBASIC2.57□□□□□ -2
H3F3CQ6NXT2 AC025588.4-201ENST00000615802 908 ntBASIC2.57□□□□□ -2
H3F3CQ6NXT2 AL355493.4-201ENST00000618530 292 ntBASIC2.57□□□□□ -2
H3F3CQ6NXT2 Z99129.2-201ENST00000619967 314 ntBASIC2.57□□□□□ -2
H3F3CQ6NXT2 AC073308.1-201ENST00000623696 305 ntBASIC2.57□□□□□ -2
H3F3CQ6NXT2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
H3F3CQ6NXT2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.57□□□□□ -2
H3F3CQ6NXT2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.57□□□□□ -2
H3F3CQ6NXT2 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.57□□□□□ -2
H3F3CQ6NXT2 AL161431.1-201ENST00000618966 4205 ntBASIC2.57□□□□□ -2
H3F3CQ6NXT2 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
H3F3CQ6NXT2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.56□□□□□ -2
H3F3CQ6NXT2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
H3F3CQ6NXT2 RNU5A-1-201ENST00000362698 116 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
H3F3CQ6NXT2 RNU6-1300P-201ENST00000391046 108 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 MTND4P13-201ENST00000402078 1023 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 RNU6-193P-201ENST00000410977 107 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 AC013262.1-201ENST00000426710 252 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 AL590383.1-201ENST00000428602 75 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.56□□□□□ -2
H3F3CQ6NXT2 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.56□□□□□ -2
H3F3CQ6NXT2 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.56□□□□□ -2
H3F3CQ6NXT2 AP000949.1-201ENST00000438328 629 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 AL513043.1-201ENST00000439124 535 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 SUMO2P2-201ENST00000456482 255 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 AC023424.2-201ENST00000493479 777 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 RPS27P26-201ENST00000494583 239 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 RNU6-928P-201ENST00000516876 104 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 AP001189.2-201ENST00000527320 189 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 HMGB1P6-201ENST00000569046 646 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.56□□□□□ -2
H3F3CQ6NXT2 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.56□□□□□ -2
H3F3CQ6NXT2 DUXAP11-201ENST00000603858 526 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 AC099785.1-201ENST00000605697 437 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 RPL23AP88-201ENST00000605759 454 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.56□□□□□ -2
H3F3CQ6NXT2 AL592148.2-201ENST00000612210 372 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 AC018926.1-201ENST00000616335 435 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
H3F3CQ6NXT2 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 AC006927.2-201ENST00000639256 389 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
H3F3CQ6NXT2 ZNF519P1-201ENST00000449011 1626 ntBASIC2.56□□□□□ -2
H3F3CQ6NXT2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
H3F3CQ6NXT2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.55□□□□□ -2
H3F3CQ6NXT2 MAPK10-266ENST00000641066 6555 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 FRG1BP-201ENST00000278882 761 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 MIR26A1-201ENST00000362205 77 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 SUGT1P1-201ENST00000379514 476 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 RNU1-109P-201ENST00000383960 147 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.55□□□□□ -2
H3F3CQ6NXT2 AL592148.1-201ENST00000413568 445 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.55□□□□□ -2
H3F3CQ6NXT2 RNF2P1-201ENST00000442955 1010 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.55□□□□□ -2
H3F3CQ6NXT2 AC244505.3-201ENST00000454598 187 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 RNU6-420P-201ENST00000458780 107 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 SNORD109B-201ENST00000458961 67 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 SNORD109A-201ENST00000459128 67 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 RPL21P41-201ENST00000459863 264 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 AC093801.2-201ENST00000503966 1050 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.55□□□□□ -2
H3F3CQ6NXT2 OR5BM1P-201ENST00000512021 366 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.55□□□□□ -2
H3F3CQ6NXT2 MTND1P36-201ENST00000522384 936 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 AP003066.2-201ENST00000529375 555 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 ELOCP31-201ENST00000540463 467 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.55□□□□□ -2
H3F3CQ6NXT2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.55□□□□□ -2
H3F3CQ6NXT2 AL161734.1-201ENST00000609720 557 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 AC006378.2-201ENST00000623178 2476 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 AC010872.1-201ENST00000624225 675 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
H3F3CQ6NXT2 OR5H6-203ENST00000642105 978 ntBASIC2.55□□□□□ -2
H3F3CQ6NXT2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.55□□□□□ -2
H3F3CQ6NXT2 AC008669.1-201ENST00000565823 2178 ntBASIC2.54□□□□□ -2
H3F3CQ6NXT2 AL365361.1-201ENST00000566942 3481 ntBASIC2.54□□□□□ -2
H3F3CQ6NXT2 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.54□□□□□ -2
H3F3CQ6NXT2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms