Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 Y_RNA.170-201ENST00000363746 110 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 Y_RNA.405-201ENST00000383979 100 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 Y_RNA.451-201ENST00000384200 100 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 Y_RNA.524-201ENST00000384564 100 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 Y_RNA.561-201ENST00000384694 100 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 MIR433-201ENST00000384837 93 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 AL079342.1-201ENST00000401460 267 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 Y_RNA.602-201ENST00000410535 92 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 AC017079.2-201ENST00000416102 485 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 AL117339.3-201ENST00000418733 162 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 MTATP6P4-201ENST00000427725 675 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 RPL12P46-201ENST00000436610 195 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 AL590399.6-201ENST00000446396 307 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 KNOP1P3-201ENST00000446933 426 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 AC023141.9-201ENST00000458734 412 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 RNA5SP103-201ENST00000459503 118 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 RNU6-1278P-201ENST00000516130 107 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 RNA5SP471-201ENST00000516971 106 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 AC107918.3-201ENST00000533272 382 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 AC026826.3-201ENST00000561747 158 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 MIR3154-201ENST00000577829 84 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 AC027229.1-201ENST00000583887 253 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 AC067852.4-201ENST00000590314 478 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 AC073657.2-201ENST00000605661 303 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 SDR42E1P1-201ENST00000611327 477 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 AC010632.3-201ENST00000611377 369 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 IGKV2OR2-10-201ENST00000613976 311 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 AC240442.1-201ENST00000616055 283 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 MIR6806-201ENST00000622141 64 ntBASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDPF1Q6NVV7 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 RNU6-704P-201ENST00000364162 103 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 RNU6-512P-201ENST00000364438 103 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 RNU6-290P-201ENST00000365212 101 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 SNORD50.2-201ENST00000365465 70 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 SNORA70E-201ENST00000384492 135 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 RNU6-837P-201ENST00000391056 108 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 SNORA77.2-201ENST00000408571 112 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 Y_RNA.626-201ENST00000411288 95 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 AL592148.1-201ENST00000413568 445 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 AC093655.2-201ENST00000425735 631 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 AC128677.1-201ENST00000436016 442 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 LINC00328-2P-201ENST00000436585 219 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 AP000281.1-201ENST00000444036 316 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 AL162739.1-201ENST00000450606 307 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 AP006222.1-205ENST00000450734 457 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 RPL7AP71-201ENST00000451120 739 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 AL356981.1-201ENST00000454879 684 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 RNU7-87P-201ENST00000459343 62 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 RPL23AP45-201ENST00000476406 468 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 RN7SL346P-201ENST00000491561 294 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 RNU6-1012P-201ENST00000516606 109 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 RNU6-612P-201ENST00000516909 102 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 CASP1P1-201ENST00000526345 212 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 SNRPCP6-201ENST00000528310 210 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 AC120057.2-201ENST00000571520 271 ntBASIC4.47□□□□□ -1.69
CDPF1Q6NVV7 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms