Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AC034229.2-201ENST00000566945 2508 ntBASIC5.73□□□□□ -1.49
PTCRAQ6ISU1 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTCRAQ6ISU1 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTCRAQ6ISU1 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 Y_RNA.398-201ENST00000383952 99 ntBASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 RNU6-937P-201ENST00000384325 106 ntBASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 SNORD78.2-201ENST00000391076 69 ntBASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 AL391219.1-201ENST00000422570 483 ntBASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 AC087650.1-201ENST00000431445 468 ntBASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 RANP8-201ENST00000444720 713 ntBASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 HSPE1P25-201ENST00000455484 251 ntBASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 AC034102.8-201ENST00000615146 484 ntBASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 BX322639.1-202ENST00000423987 2213 ntBASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTCRAQ6ISU1 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
PTCRAQ6ISU1 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
PTCRAQ6ISU1 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.71□□□□□ -1.49
PTCRAQ6ISU1 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PTCRAQ6ISU1 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PTCRAQ6ISU1 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 RN7SKP113-201ENST00000363891 295 ntBASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 RNU6-102P-201ENST00000384485 104 ntBASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 U3.39-201ENST00000408569 239 ntBASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 Y_RNA.629-201ENST00000411368 105 ntBASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 AL133482.1-201ENST00000415988 498 ntBASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 MRPS21P3-201ENST00000436696 262 ntBASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 BX276092.4-201ENST00000452056 248 ntBASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 RNU7-87P-201ENST00000459343 62 ntBASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 RN7SL354P-201ENST00000469282 294 ntBASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 RN7SL817P-201ENST00000480777 288 ntBASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 RNU7-175P-201ENST00000515915 61 ntBASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 SNORD116-28-201ENST00000516123 91 ntBASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 Y_RNA.706-201ENST00000516933 99 ntBASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 AC024940.3-201ENST00000538551 316 ntBASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 MIR4282-201ENST00000583613 67 ntBASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 AC104465.1-201ENST00000611365 139 ntBASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 MIR6758-201ENST00000620653 63 ntBASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 DOCK11P1-201ENST00000553480 5932 ntBASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 AL591135.1-201ENST00000401578 5914 ntBASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 AC008725.1-201ENST00000605123 2263 ntBASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.71□□□□□ -1.5
PTCRAQ6ISU1 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTCRAQ6ISU1 AC110373.1-201ENST00000505994 3505 ntBASIC5.7□□□□□ -1.5
PTCRAQ6ISU1 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTCRAQ6ISU1 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.7□□□□□ -1.5
PTCRAQ6ISU1 AC139769.1-204ENST00000472297 1931 ntBASIC5.7□□□□□ -1.5
PTCRAQ6ISU1 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.7□□□□□ -1.5
PTCRAQ6ISU1 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTCRAQ6ISU1 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.7□□□□□ -1.5
PTCRAQ6ISU1 AC126755.2-208ENST00000327792 462 ntBASIC5.7□□□□□ -1.5
PTCRAQ6ISU1 AC138969.1-213ENST00000331436 462 ntBASIC5.7□□□□□ -1.5
PTCRAQ6ISU1 RNU6-989P-201ENST00000362756 107 ntBASIC5.7□□□□□ -1.5
PTCRAQ6ISU1 Y_RNA.405-201ENST00000383979 100 ntBASIC5.7□□□□□ -1.5
PTCRAQ6ISU1 Y_RNA.451-201ENST00000384200 100 ntBASIC5.7□□□□□ -1.5
PTCRAQ6ISU1 Y_RNA.524-201ENST00000384564 100 ntBASIC5.7□□□□□ -1.5
PTCRAQ6ISU1 Y_RNA.561-201ENST00000384694 100 ntBASIC5.7□□□□□ -1.5
PTCRAQ6ISU1 RNU6-918P-201ENST00000391219 106 ntBASIC5.7□□□□□ -1.5
PTCRAQ6ISU1 RPL23AP36-201ENST00000413895 458 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms