Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MIR137-201ENST00000385223 102 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 AC114491.1-201ENST00000416095 246 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 AL139095.3-201ENST00000419672 1203 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 RPL17P36-201ENST00000420302 549 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 AC243428.1-201ENST00000421099 264 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 RPL7P46-201ENST00000425129 740 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF43Q68DV7 AC011816.1-201ENST00000441346 546 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 RBMY2TP-201ENST00000451162 947 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 HMGB3P21-201ENST00000452483 547 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 PRELID3BP1-201ENST00000457142 540 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 snoU13.8-201ENST00000458890 104 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 RPL39P38-201ENST00000467018 153 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 FO393415.2-201ENST00000480085 343 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 AC021382.1-201ENST00000483523 359 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 HMGB1P35-201ENST00000503360 598 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 AC009901.1-201ENST00000506703 541 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 MRPS33P2-201ENST00000507850 322 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 TBCAP3-201ENST00000512475 312 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 RPL23AP53-201ENST00000521854 457 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF43Q68DV7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.19□□□□□ -1.58
RNF43Q68DV7 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF43Q68DV7 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF43Q68DV7 AC024619.4-201ENST00000580924 316 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 AC000123.2-201ENST00000623124 461 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.19□□□□□ -1.58
RNF43Q68DV7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF43Q68DV7 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF43Q68DV7 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RNF43Q68DV7 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF43Q68DV7 AC026523.2-201ENST00000625039 7739 ntBASIC5.19□□□□□ -1.58
RNF43Q68DV7 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF43Q68DV7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
RNF43Q68DV7 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF43Q68DV7 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
RNF43Q68DV7 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF43Q68DV7 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF43Q68DV7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
RNF43Q68DV7 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF43Q68DV7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.18□□□□□ -1.58
RNF43Q68DV7 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
RNF43Q68DV7 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF43Q68DV7 RNU6-746P-201ENST00000384112 109 ntBASIC5.18□□□□□ -1.58
RNF43Q68DV7 Y_RNA.785-201ENST00000384290 109 ntBASIC5.18□□□□□ -1.58
RNF43Q68DV7 U3.32-201ENST00000408116 212 ntBASIC5.18□□□□□ -1.58
RNF43Q68DV7 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.18□□□□□ -1.58
RNF43Q68DV7 MRPS18CP6-201ENST00000423587 223 ntBASIC5.18□□□□□ -1.58
RNF43Q68DV7 USMG5P1-201ENST00000425964 177 ntBASIC5.18□□□□□ -1.58
RNF43Q68DV7 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.18□□□□□ -1.58
RNF43Q68DV7 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF43Q68DV7 AC104332.1-201ENST00000440471 797 ntBASIC5.18□□□□□ -1.58
RNF43Q68DV7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF43Q68DV7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF43Q68DV7 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.18□□□□□ -1.58
RNF43Q68DV7 SCARNA18-201ENST00000459004 134 ntBASIC5.18□□□□□ -1.58
RNF43Q68DV7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF43Q68DV7 RN7SL443P-201ENST00000464331 290 ntBASIC5.18□□□□□ -1.58
RNF43Q68DV7 RN7SL809P-201ENST00000482040 297 ntBASIC5.18□□□□□ -1.58
RNF43Q68DV7 AC022447.4-201ENST00000504053 364 ntBASIC5.18□□□□□ -1.58
RNF43Q68DV7 AC104806.1-201ENST00000508720 308 ntBASIC5.18□□□□□ -1.58
RNF43Q68DV7 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF43Q68DV7 Y_RNA.715-201ENST00000517082 110 ntBASIC5.18□□□□□ -1.58
RNF43Q68DV7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF43Q68DV7 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.18□□□□□ -1.58
RNF43Q68DV7 OR5D17P-201ENST00000531492 978 ntBASIC5.18□□□□□ -1.58
RNF43Q68DV7 AL110118.1-201ENST00000553543 400 ntBASIC5.18□□□□□ -1.58
RNF43Q68DV7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.18□□□□□ -1.58
RNF43Q68DV7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF43Q68DV7 VN1R84P-201ENST00000593697 235 ntBASIC5.18□□□□□ -1.58
RNF43Q68DV7 AC006254.3-201ENST00000603353 884 ntBASIC5.18□□□□□ -1.58
RNF43Q68DV7 Z98751.3-201ENST00000604447 521 ntBASIC5.18□□□□□ -1.58
RNF43Q68DV7 MIR6780A-201ENST00000615089 68 ntBASIC5.18□□□□□ -1.58
RNF43Q68DV7 MIR7703-201ENST00000620784 77 ntBASIC5.18□□□□□ -1.58
RNF43Q68DV7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.18□□□□□ -1.58
RNF43Q68DV7 AL022322.2-201ENST00000624072 20397 ntBASIC5.18□□□□□ -1.58
RNF43Q68DV7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
RNF43Q68DV7 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
RNF43Q68DV7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF43Q68DV7 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
RNF43Q68DV7 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF43Q68DV7 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF43Q68DV7 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
RNF43Q68DV7 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF43Q68DV7 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF43Q68DV7 AC079741.1-201ENST00000321498 212 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RNF43Q68DV7 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF43Q68DV7 RNA5SP258-201ENST00000362750 119 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 Y_RNA.150-201ENST00000363562 102 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 Y_RNA.291-201ENST00000364886 113 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF43Q68DV7 SNORA66-201ENST00000384792 133 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 RNU6-1093P-201ENST00000391194 107 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 GLULP6-201ENST00000399502 913 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF43Q68DV7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF43Q68DV7 AL606753.1-201ENST00000427435 87 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 AC022022.1-201ENST00000430304 178 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms