Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 RNU6-359P-201ENST00000365466 108 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 RNU5A-2P-201ENST00000384337 116 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 Y_RNA.548-201ENST00000384656 105 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 RPS3AP26-201ENST00000398259 784 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 MTCO1P17-201ENST00000411522 491 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 BEND7P1-201ENST00000422058 457 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 BX119904.4-201ENST00000424402 301 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AL445669.1-201ENST00000426743 755 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 VN1R108P-201ENST00000431580 830 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 THAP5P1-201ENST00000439089 262 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 RABEPKP1-201ENST00000440529 1026 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AP000542.1-201ENST00000448473 371 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AC092754.2-201ENST00000463506 460 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AC084357.1-201ENST00000473404 255 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AC078785.3-201ENST00000476607 425 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AC068724.1-201ENST00000487100 792 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AC106872.3-201ENST00000495104 446 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AC097462.2-201ENST00000504623 481 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 POU5F1P7-201ENST00000508759 541 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 MTND5P13-201ENST00000513046 1079 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 SNORA31.8-201ENST00000516327 108 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AC022080.3-201ENST00000544433 482 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 HIGD1AP1-201ENST00000550979 275 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 BNIP3P23-201ENST00000599655 511 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AC006254.3-201ENST00000603353 884 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AC011451.2-201ENST00000604303 598 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AC073114.1-201ENST00000612027 490 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AC002550.2-201ENST00000621246 394 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 AL021368.2-201ENST00000606125 5352 ntBASIC3.31□□□□□ -1.88
LYSMD4Q5XG99 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 PABPC1P9-201ENST00000426076 1612 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 CR383658.2-201ENST00000547576 1525 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 SNORA80A-201ENST00000363922 136 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 SNORD116-9-201ENST00000384000 95 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 SNORD116-3-201ENST00000384287 95 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 SNORD116-7-201ENST00000384404 95 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 SNORD116-5-201ENST00000384462 95 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 MIR135A2-201ENST00000384854 100 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 MTCYBP36-201ENST00000404146 440 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 RPL23AP39-201ENST00000415533 405 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 MTCO1P39-201ENST00000426148 480 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 MTCO2P16-201ENST00000436962 677 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 RSU1P2-202ENST00000437884 485 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 TRIM60P18-201ENST00000441518 828 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 TAF9P1-201ENST00000445421 515 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 TAF9P2-201ENST00000454958 515 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 RPL23AP31-201ENST00000456160 467 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 RNU1-61P-201ENST00000516107 151 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 MIR2114-201ENST00000516645 80 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 AC013828.2-201ENST00000532487 235 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 AC068587.4-201ENST00000533893 186 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 AC092851.1-201ENST00000535964 478 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms