Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 Y_RNA.31-201ENST00000362574 102 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 RNU6-1120P-201ENST00000362988 108 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 RNU6-744P-201ENST00000365557 107 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 RNU4-20P-201ENST00000365601 151 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 SNORA20.2-201ENST00000383922 131 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 RNU6-1316P-201ENST00000384242 108 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 MIR559-201ENST00000385188 96 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 MT-TR-201ENST00000387439 65 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AL590704.1-201ENST00000402856 794 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC245054.2-201ENST00000415639 319 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC113618.1-201ENST00000416747 285 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC009302.1-201ENST00000417147 390 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 OR1AA1P-201ENST00000419597 916 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 ELOCP4-201ENST00000420090 333 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC069213.2-201ENST00000420238 366 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 RBMY1KP-201ENST00000423480 476 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AL513533.1-201ENST00000453728 415 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 ANP32BP2-201ENST00000454525 545 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 RNU6-329P-201ENST00000459618 107 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC026410.2-201ENST00000460281 156 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 RPL7P22-201ENST00000466005 733 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 SCARNA24.1-201ENST00000516465 137 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 RNU6-714P-201ENST00000516963 103 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 Y_RNA.711-201ENST00000516993 102 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 IGLVIV-65-201ENST00000517313 360 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 SUMO2P20-201ENST00000520803 283 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC026464.5-201ENST00000562497 722 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC136443.5-201ENST00000603741 370 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 HSPE1P14-201ENST00000605812 302 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC084781.2-201ENST00000615568 161 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC007546.1-201ENST00000619452 559 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC079684.1-201ENST00000621405 437 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AL773545.4-201ENST00000637262 310 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC010149.2-201ENST00000637608 315 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AL513478.4-201ENST00000641636 310 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AL049780.3-201ENST00000624612 1583 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 OR56B2P-202ENST00000641377 2453 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC025125.1-201ENST00000624743 1922 ntBASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.19□□□□□ -1.9
GFI1BQ5VTD9 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 MTND5P1-201ENST00000445440 1375 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 OR5P1P-201ENST00000299512 925 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 RPL23AP57-201ENST00000332361 466 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 Y_RNA.133-201ENST00000363428 110 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 RNA5SP175-201ENST00000364275 119 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 Y_RNA.259-201ENST00000364619 101 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 RNY4P16-201ENST00000364768 94 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 SNORA33.2-201ENST00000365413 134 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 SNORA4.3-201ENST00000365564 137 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 RNU6-921P-201ENST00000384361 107 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 RNU6-831P-201ENST00000384548 107 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 MIR184-201ENST00000384962 84 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 EIF5P1-201ENST00000400019 1231 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 RPS16P5-201ENST00000406501 404 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 RPL5P18-201ENST00000406671 891 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 RNU6-373P-201ENST00000411247 98 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 RNU6-1304P-201ENST00000411374 106 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 TMSB10P2-201ENST00000416049 131 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 AL139095.3-201ENST00000419672 1203 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 RPEP3-201ENST00000425462 676 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 AC011998.1-201ENST00000433403 117 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 AL132765.1-201ENST00000434165 553 ntBASIC3.18□□□□□ -1.9
GFI1BQ5VTD9 AL049734.2-201ENST00000441066 616 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms