Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 SETP2-201ENST00000553886 926 ntBASIC2.13□□□□□ -2.07
NUP188Q5SRE5 AL161713.1-201ENST00000555538 145 ntBASIC2.13□□□□□ -2.07
NUP188Q5SRE5 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.13□□□□□ -2.07
NUP188Q5SRE5 AC090425.2-201ENST00000608818 501 ntBASIC2.13□□□□□ -2.07
NUP188Q5SRE5 MIR7973-1-201ENST00000614683 76 ntBASIC2.13□□□□□ -2.07
NUP188Q5SRE5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.13□□□□□ -2.07
NUP188Q5SRE5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
NUP188Q5SRE5 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.13□□□□□ -2.07
NUP188Q5SRE5 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
NUP188Q5SRE5 RNU1-93P-201ENST00000364704 169 ntBASIC2.12□□□□□ -2.07
NUP188Q5SRE5 DEFB109C-201ENST00000382575 264 ntBASIC2.12□□□□□ -2.07
NUP188Q5SRE5 DEFB109B-201ENST00000382656 264 ntBASIC2.12□□□□□ -2.07
NUP188Q5SRE5 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.12□□□□□ -2.07
NUP188Q5SRE5 AC073464.3-201ENST00000422564 712 ntBASIC2.12□□□□□ -2.07
NUP188Q5SRE5 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.12□□□□□ -2.07
NUP188Q5SRE5 AC011979.1-201ENST00000472300 483 ntBASIC2.12□□□□□ -2.07
NUP188Q5SRE5 RPL21P93-201ENST00000480465 489 ntBASIC2.12□□□□□ -2.07
NUP188Q5SRE5 AC233702.1-201ENST00000482905 502 ntBASIC2.12□□□□□ -2.07
NUP188Q5SRE5 AC093591.1-201ENST00000491435 481 ntBASIC2.12□□□□□ -2.07
NUP188Q5SRE5 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.12□□□□□ -2.07
NUP188Q5SRE5 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.12□□□□□ -2.07
NUP188Q5SRE5 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.12□□□□□ -2.07
NUP188Q5SRE5 AL731537.2-201ENST00000561565 951 ntBASIC2.12□□□□□ -2.07
NUP188Q5SRE5 AC015720.1-201ENST00000565251 277 ntBASIC2.12□□□□□ -2.07
NUP188Q5SRE5 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.12□□□□□ -2.07
NUP188Q5SRE5 AC136443.5-201ENST00000603741 370 ntBASIC2.12□□□□□ -2.07
NUP188Q5SRE5 AC121333.1-201ENST00000567488 2709 ntBASIC2.12□□□□□ -2.07
NUP188Q5SRE5 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
NUP188Q5SRE5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.12□□□□□ -2.07
NUP188Q5SRE5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
NUP188Q5SRE5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
NUP188Q5SRE5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
NUP188Q5SRE5 OR4G11P-202ENST00000642116 1414 ntBASIC2.12□□□□□ -2.07
NUP188Q5SRE5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.11□□□□□ -2.07
NUP188Q5SRE5 SNORA16.1-201ENST00000364597 132 ntBASIC2.11□□□□□ -2.07
NUP188Q5SRE5 RNU6-60P-201ENST00000364792 103 ntBASIC2.11□□□□□ -2.07
NUP188Q5SRE5 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.11□□□□□ -2.07
NUP188Q5SRE5 AC114973.1-201ENST00000429057 632 ntBASIC2.11□□□□□ -2.07
NUP188Q5SRE5 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.11□□□□□ -2.07
NUP188Q5SRE5 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.11□□□□□ -2.07
NUP188Q5SRE5 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.11□□□□□ -2.07
NUP188Q5SRE5 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.11□□□□□ -2.07
NUP188Q5SRE5 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.11□□□□□ -2.07
NUP188Q5SRE5 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.11□□□□□ -2.07
NUP188Q5SRE5 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.11□□□□□ -2.07
NUP188Q5SRE5 AC234775.3-201ENST00000564612 656 ntBASIC2.11□□□□□ -2.07
NUP188Q5SRE5 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
NUP188Q5SRE5 RNU1-109P-201ENST00000383960 147 ntBASIC2.11□□□□□ -2.07
NUP188Q5SRE5 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.11□□□□□ -2.07
NUP188Q5SRE5 MTCYBP37-201ENST00000510642 1133 ntBASIC2.11□□□□□ -2.07
NUP188Q5SRE5 AC109471.1-201ENST00000511631 612 ntBASIC2.11□□□□□ -2.07
NUP188Q5SRE5 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.11□□□□□ -2.07
NUP188Q5SRE5 AP001804.3-201ENST00000525146 880 ntBASIC2.11□□□□□ -2.07
NUP188Q5SRE5 AC016957.1-201ENST00000534895 309 ntBASIC2.11□□□□□ -2.07
NUP188Q5SRE5 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.11□□□□□ -2.07
NUP188Q5SRE5 MIR4458-201ENST00000578872 75 ntBASIC2.11□□□□□ -2.07
NUP188Q5SRE5 VN1R84P-201ENST00000593697 235 ntBASIC2.11□□□□□ -2.07
NUP188Q5SRE5 AC006023.2-201ENST00000609916 167 ntBASIC2.11□□□□□ -2.07
NUP188Q5SRE5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
NUP188Q5SRE5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
NUP188Q5SRE5 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NUP188Q5SRE5 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NUP188Q5SRE5 RNU1-42P-201ENST00000364033 160 ntBASIC2.1□□□□□ -2.07
NUP188Q5SRE5 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NUP188Q5SRE5 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.1□□□□□ -2.07
NUP188Q5SRE5 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.1□□□□□ -2.07
NUP188Q5SRE5 XKRYP6-201ENST00000440468 1116 ntBASIC2.1□□□□□ -2.07
NUP188Q5SRE5 XKRYP3-201ENST00000442113 1116 ntBASIC2.1□□□□□ -2.07
NUP188Q5SRE5 AC079203.1-201ENST00000487972 404 ntBASIC2.1□□□□□ -2.07
NUP188Q5SRE5 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NUP188Q5SRE5 AF131216.2-201ENST00000512316 564 ntBASIC2.1□□□□□ -2.07
NUP188Q5SRE5 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.1□□□□□ -2.07
NUP188Q5SRE5 RNU6-1223P-201ENST00000517124 104 ntBASIC2.1□□□□□ -2.07
NUP188Q5SRE5 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.1□□□□□ -2.07
NUP188Q5SRE5 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.1□□□□□ -2.07
NUP188Q5SRE5 AL163153.1-201ENST00000554223 283 ntBASIC2.1□□□□□ -2.07
NUP188Q5SRE5 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.1□□□□□ -2.07
NUP188Q5SRE5 AC113368.1-201ENST00000603736 382 ntBASIC2.1□□□□□ -2.07
NUP188Q5SRE5 STMN1P1-201ENST00000617809 440 ntBASIC2.1□□□□□ -2.07
NUP188Q5SRE5 Y_RNA.295-201ENST00000364918 102 ntBASIC2.09□□□□□ -2.07
NUP188Q5SRE5 SNORD48-201ENST00000364953 64 ntBASIC2.09□□□□□ -2.07
NUP188Q5SRE5 CCNB2P1-201ENST00000399411 1150 ntBASIC2.09□□□□□ -2.07
NUP188Q5SRE5 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.09□□□□□ -2.07
NUP188Q5SRE5 HMGN2P20-201ENST00000437531 273 ntBASIC2.09□□□□□ -2.07
NUP188Q5SRE5 BNIP3P2-201ENST00000441221 577 ntBASIC2.09□□□□□ -2.07
NUP188Q5SRE5 TPT1P14-201ENST00000448018 505 ntBASIC2.09□□□□□ -2.07
NUP188Q5SRE5 OR7L1P-201ENST00000456181 380 ntBASIC2.09□□□□□ -2.07
NUP188Q5SRE5 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.09□□□□□ -2.07
NUP188Q5SRE5 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.09□□□□□ -2.07
NUP188Q5SRE5 HAUS1P1-201ENST00000505275 832 ntBASIC2.09□□□□□ -2.07
NUP188Q5SRE5 IGKV2D-36-201ENST00000518643 226 ntBASIC2.09□□□□□ -2.07
NUP188Q5SRE5 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.09□□□□□ -2.07
NUP188Q5SRE5 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.09□□□□□ -2.07
NUP188Q5SRE5 AL137100.2-201ENST00000555786 315 ntBASIC2.09□□□□□ -2.07
NUP188Q5SRE5 AP001029.3-201ENST00000588063 596 ntBASIC2.09□□□□□ -2.07
NUP188Q5SRE5 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.09□□□□□ -2.07
NUP188Q5SRE5 ZNF876P-202ENST00000398732 1485 ntBASIC2.09□□□□□ -2.07
NUP188Q5SRE5 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
NUP188Q5SRE5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
NUP188Q5SRE5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms