Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC093162.1-201ENST00000419682 124 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 AL031736.2-201ENST00000426573 787 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 RPL36P19-201ENST00000430744 301 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 RPS11P7-201ENST00000442125 465 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 ISCUP1-201ENST00000454451 448 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 SNORD97-201ENST00000459187 142 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 AC091180.1-201ENST00000462104 372 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 RPL21P103-201ENST00000479921 488 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 AC022133.1-201ENST00000490961 571 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 RNU6-496P-201ENST00000516145 99 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 AP000859.1-201ENST00000525536 307 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 AL133271.1-201ENST00000538229 291 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 MIR4679-2-201ENST00000578358 77 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 AL121917.1-203ENST00000605534 577 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CTC1Q2NKJ3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 OR9K1P-202ENST00000641111 3217 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 RN7SKP185-201ENST00000362813 326 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 Y_RNA.218-201ENST00000364218 104 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 RNU1-43P-201ENST00000365052 165 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 RNU6-449P-201ENST00000383914 107 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 SNORA5.1-201ENST00000384275 131 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 AC234779.1-201ENST00000425910 285 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 VTI1BP4-201ENST00000427516 527 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 AC004129.2-201ENST00000457229 287 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 RNU1-88P-201ENST00000459274 128 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 RNU7-138P-201ENST00000459479 64 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 AC006463.2-201ENST00000473326 348 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 HMGN2P13-201ENST00000476476 274 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 AC005951.2-201ENST00000576282 495 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 MIR4504-201ENST00000577413 92 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 MIR4330-201ENST00000579077 105 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 MIR4293-201ENST00000584305 78 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 AL160281.1-201ENST00000605307 311 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 uc_338.18-201ENST00000615451 175 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 AC025574.2-201ENST00000615621 514 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 AL596245.1-201ENST00000618994 362 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 AC008568.2-201ENST00000623862 2313 ntBASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CTC1Q2NKJ3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 MIR133B-201ENST00000362210 119 ntBASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 RNU6-946P-201ENST00000383878 107 ntBASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 RNU6-937P-201ENST00000384325 106 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms