Protein–RNA interactions for Protein: Q1ED39

KNOP1, Lysine-rich nucleolar protein 1, humanhuman

Known RBP Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1Q1ED39 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.19□□□□□ -1.9
KNOP1Q1ED39 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.19□□□□□ -1.9
KNOP1Q1ED39 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.19□□□□□ -1.9
KNOP1Q1ED39 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.19□□□□□ -1.9
KNOP1Q1ED39 AL590233.1-201ENST00000430017 456 ntBASIC3.19□□□□□ -1.9
KNOP1Q1ED39 EZH2P1-201ENST00000431167 291 ntBASIC3.19□□□□□ -1.9
KNOP1Q1ED39 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.19□□□□□ -1.9
KNOP1Q1ED39 UBE2D3P1-201ENST00000436669 444 ntBASIC3.19□□□□□ -1.9
KNOP1Q1ED39 EEF1E1P1-201ENST00000446998 430 ntBASIC3.19□□□□□ -1.9
KNOP1Q1ED39 AL133217.1-201ENST00000450980 425 ntBASIC3.19□□□□□ -1.9
KNOP1Q1ED39 AC017015.1-201ENST00000477387 286 ntBASIC3.19□□□□□ -1.9
KNOP1Q1ED39 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.19□□□□□ -1.9
KNOP1Q1ED39 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.19□□□□□ -1.9
KNOP1Q1ED39 AC010486.2-201ENST00000505572 483 ntBASIC3.19□□□□□ -1.9
KNOP1Q1ED39 RNU6-27P-201ENST00000516146 107 ntBASIC3.19□□□□□ -1.9
KNOP1Q1ED39 RNA5SP341-201ENST00000516261 117 ntBASIC3.19□□□□□ -1.9
KNOP1Q1ED39 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.19□□□□□ -1.9
KNOP1Q1ED39 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.19□□□□□ -1.9
KNOP1Q1ED39 FAM60DP-201ENST00000524174 632 ntBASIC3.19□□□□□ -1.9
KNOP1Q1ED39 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
KNOP1Q1ED39 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KNOP1Q1ED39 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.19□□□□□ -1.9
KNOP1Q1ED39 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.19□□□□□ -1.9
KNOP1Q1ED39 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.19□□□□□ -1.9
KNOP1Q1ED39 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KNOP1Q1ED39 AP000811.1-201ENST00000603803 651 ntBASIC3.19□□□□□ -1.9
KNOP1Q1ED39 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.19□□□□□ -1.9
KNOP1Q1ED39 AC009039.2-201ENST00000624524 529 ntBASIC3.19□□□□□ -1.9
KNOP1Q1ED39 AC091925.2-201ENST00000625059 256 ntBASIC3.19□□□□□ -1.9
KNOP1Q1ED39 AL672296.1-201ENST00000427780 2158 ntBASIC3.19□□□□□ -1.9
KNOP1Q1ED39 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.19□□□□□ -1.9
KNOP1Q1ED39 AC087359.1-201ENST00000508335 1740 ntBASIC3.19□□□□□ -1.9
KNOP1Q1ED39 AL356473.1-201ENST00000406203 1408 ntBASIC3.19□□□□□ -1.9
KNOP1Q1ED39 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KNOP1Q1ED39 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
KNOP1Q1ED39 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.18□□□□□ -1.9
KNOP1Q1ED39 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
KNOP1Q1ED39 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KNOP1Q1ED39 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.18□□□□□ -1.9
KNOP1Q1ED39 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
KNOP1Q1ED39 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.18□□□□□ -1.9
KNOP1Q1ED39 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.18□□□□□ -1.9
KNOP1Q1ED39 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KNOP1Q1ED39 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.18□□□□□ -1.9
KNOP1Q1ED39 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.18□□□□□ -1.9
KNOP1Q1ED39 SNORD51-201ENST00000384320 80 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 RNU6-851P-201ENST00000384565 107 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 AL031679.1-201ENST00000400616 525 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 RNU2-15P-201ENST00000410692 191 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 RNU4-72P-201ENST00000410754 173 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.18□□□□□ -1.9
KNOP1Q1ED39 AL451074.5-201ENST00000415894 435 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 AC019178.2-201ENST00000423595 505 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 MTND4P20-201ENST00000424125 869 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 DUTP6-201ENST00000425573 462 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 AC007742.1-201ENST00000425789 329 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 NEK4P1-201ENST00000433383 879 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 AC244505.4-201ENST00000434905 287 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 ELOCP26-201ENST00000436067 329 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 MUPP-201ENST00000438111 566 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 HSPE1P28-201ENST00000443139 211 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 SSXP5-201ENST00000443473 287 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 HMGB1P25-201ENST00000468402 607 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 RPL31P50-201ENST00000471002 296 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 RN7SL283P-201ENST00000489055 303 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 LTV1P1-201ENST00000510683 1237 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 RNA5SP216-201ENST00000516111 123 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.18□□□□□ -1.9
KNOP1Q1ED39 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.18□□□□□ -1.9
KNOP1Q1ED39 EEF1B2P4-201ENST00000551398 348 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KNOP1Q1ED39 AC136618.2-201ENST00000575091 400 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 AC083760.1-201ENST00000589621 670 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.18□□□□□ -1.9
KNOP1Q1ED39 AC090115.4-201ENST00000609970 188 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 AL357080.1-201ENST00000617394 239 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 AL590240.3-201ENST00000621416 943 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 AL445264.1-201ENST00000621719 171 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 AC091953.5-201ENST00000622919 233 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 AP000676.3-201ENST00000623299 569 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 AC008264.2-201ENST00000610193 3731 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 GABRG2-229ENST00000641017 3628 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
KNOP1Q1ED39 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KNOP1Q1ED39 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
KNOP1Q1ED39 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 AC011477.1-204ENST00000623416 1325 ntBASIC3.18□□□□□ -1.9
KNOP1Q1ED39 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KNOP1Q1ED39 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.17□□□□□ -1.9
KNOP1Q1ED39 AC096644.4-201ENST00000563417 2912 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KNOP1Q1ED39 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
KNOP1Q1ED39 RNU6-462P-201ENST00000362659 105 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 Y_RNA.169-201ENST00000363745 96 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 SNORA48.8-201ENST00000391324 134 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KNOP1Q1ED39 MTATP6P27-201ENST00000416987 621 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.17□□□□□ -1.9
KNOP1Q1ED39 MTCO2P5-201ENST00000422621 426 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms