Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.58□□□□□ -2
HMGXB3Q12766 AL049779.4-201ENST00000604500 156 ntBASIC2.58□□□□□ -2
HMGXB3Q12766 CR382285.2-201ENST00000624662 1495 ntBASIC2.57□□□□□ -2
HMGXB3Q12766 AC068700.1-201ENST00000565862 3754 ntBASIC2.57□□□□□ -2
HMGXB3Q12766 U8.1-201ENST00000362843 134 ntBASIC2.57□□□□□ -2
HMGXB3Q12766 DEFB109C-201ENST00000382575 264 ntBASIC2.57□□□□□ -2
HMGXB3Q12766 DEFB109B-201ENST00000382656 264 ntBASIC2.57□□□□□ -2
HMGXB3Q12766 ERHP2-201ENST00000402323 299 ntBASIC2.57□□□□□ -2
HMGXB3Q12766 RPS6P15-201ENST00000431996 751 ntBASIC2.57□□□□□ -2
HMGXB3Q12766 MTND4LP16-201ENST00000440828 295 ntBASIC2.57□□□□□ -2
HMGXB3Q12766 HMGN1P8-201ENST00000463578 288 ntBASIC2.57□□□□□ -2
HMGXB3Q12766 BNIP3P4-201ENST00000604946 565 ntBASIC2.57□□□□□ -2
HMGXB3Q12766 AC004943.3-201ENST00000624116 600 ntBASIC2.57□□□□□ -2
HMGXB3Q12766 AC092159.4-201ENST00000624944 550 ntBASIC2.57□□□□□ -2
HMGXB3Q12766 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.57□□□□□ -2
HMGXB3Q12766 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.56□□□□□ -2
HMGXB3Q12766 AC023128.2-201ENST00000420880 1223 ntBASIC2.56□□□□□ -2
HMGXB3Q12766 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.56□□□□□ -2
HMGXB3Q12766 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.56□□□□□ -2
HMGXB3Q12766 AC004223.1-201ENST00000479840 271 ntBASIC2.56□□□□□ -2
HMGXB3Q12766 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.56□□□□□ -2
HMGXB3Q12766 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.56□□□□□ -2
HMGXB3Q12766 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.56□□□□□ -2
HMGXB3Q12766 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.56□□□□□ -2
HMGXB3Q12766 AC016957.1-201ENST00000534895 309 ntBASIC2.56□□□□□ -2
HMGXB3Q12766 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.56□□□□□ -2
HMGXB3Q12766 TRAV28-201ENST00000557548 323 ntBASIC2.56□□□□□ -2
HMGXB3Q12766 AC024614.2-201ENST00000577584 372 ntBASIC2.56□□□□□ -2
HMGXB3Q12766 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.56□□□□□ -2
HMGXB3Q12766 AL078603.1-201ENST00000603824 313 ntBASIC2.56□□□□□ -2
HMGXB3Q12766 MIR7973-1-201ENST00000614683 76 ntBASIC2.56□□□□□ -2
HMGXB3Q12766 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HMGXB3Q12766 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.55□□□□□ -2
HMGXB3Q12766 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.55□□□□□ -2
HMGXB3Q12766 RPL5P19-201ENST00000404228 893 ntBASIC2.55□□□□□ -2
HMGXB3Q12766 KATNBL1P3-201ENST00000443475 909 ntBASIC2.55□□□□□ -2
HMGXB3Q12766 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.55□□□□□ -2
HMGXB3Q12766 MIR151B-201ENST00000584249 96 ntBASIC2.55□□□□□ -2
HMGXB3Q12766 AL135786.2-201ENST00000608422 615 ntBASIC2.55□□□□□ -2
HMGXB3Q12766 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.54□□□□□ -2
HMGXB3Q12766 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.54□□□□□ -2
HMGXB3Q12766 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.54□□□□□ -2
HMGXB3Q12766 SETP2-201ENST00000553886 926 ntBASIC2.54□□□□□ -2
HMGXB3Q12766 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.54□□□□□ -2
HMGXB3Q12766 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.54□□□□□ -2
HMGXB3Q12766 MIR6734-201ENST00000621166 68 ntBASIC2.54□□□□□ -2
HMGXB3Q12766 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HMGXB3Q12766 RNU4-51P-201ENST00000364206 140 ntBASIC2.53□□□□□ -2
HMGXB3Q12766 RNU6-1080P-201ENST00000383982 107 ntBASIC2.53□□□□□ -2
HMGXB3Q12766 RNU6-342P-201ENST00000384521 104 ntBASIC2.53□□□□□ -2
HMGXB3Q12766 SUMO2P12-201ENST00000405924 140 ntBASIC2.53□□□□□ -2
HMGXB3Q12766 AL023807.1-201ENST00000407932 359 ntBASIC2.53□□□□□ -2
HMGXB3Q12766 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.53□□□□□ -2
HMGXB3Q12766 CLIC4P1-201ENST00000453177 535 ntBASIC2.53□□□□□ -2
HMGXB3Q12766 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.53□□□□□ -2
HMGXB3Q12766 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.53□□□□□ -2
HMGXB3Q12766 AL137100.2-201ENST00000555786 315 ntBASIC2.53□□□□□ -2
HMGXB3Q12766 AL731537.2-201ENST00000561565 951 ntBASIC2.53□□□□□ -2
HMGXB3Q12766 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.53□□□□□ -2
HMGXB3Q12766 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HMGXB3Q12766 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
HMGXB3Q12766 MTND2P29-201ENST00000438595 412 ntBASIC2.52□□□□□ -2.01
HMGXB3Q12766 AL353093.1-201ENST00000441292 436 ntBASIC2.52□□□□□ -2.01
HMGXB3Q12766 MTCYBP18-201ENST00000501056 747 ntBASIC2.52□□□□□ -2.01
HMGXB3Q12766 AC006390.1-201ENST00000508068 283 ntBASIC2.52□□□□□ -2.01
HMGXB3Q12766 RNU6-1223P-201ENST00000517124 104 ntBASIC2.52□□□□□ -2.01
HMGXB3Q12766 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.52□□□□□ -2.01
HMGXB3Q12766 AC084757.1-201ENST00000559987 490 ntBASIC2.52□□□□□ -2.01
HMGXB3Q12766 SNORD39.2-201ENST00000579995 76 ntBASIC2.52□□□□□ -2.01
HMGXB3Q12766 AL133393.1-201ENST00000603277 287 ntBASIC2.52□□□□□ -2.01
HMGXB3Q12766 AC080078.3-201ENST00000605407 463 ntBASIC2.52□□□□□ -2.01
HMGXB3Q12766 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.52□□□□□ -2.01
HMGXB3Q12766 AC006023.2-201ENST00000609916 167 ntBASIC2.52□□□□□ -2.01
HMGXB3Q12766 MIR6515-201ENST00000619843 57 ntBASIC2.52□□□□□ -2.01
HMGXB3Q12766 DDX10P1-201ENST00000448545 1933 ntBASIC2.52□□□□□ -2.01
HMGXB3Q12766 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HMGXB3Q12766 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HMGXB3Q12766 RNU6-603P-201ENST00000411403 107 ntBASIC2.52□□□□□ -2.01
HMGXB3Q12766 HMGB3P2-201ENST00000411913 584 ntBASIC2.52□□□□□ -2.01
HMGXB3Q12766 AL591704.1-201ENST00000432574 275 ntBASIC2.52□□□□□ -2.01
HMGXB3Q12766 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.52□□□□□ -2.01
HMGXB3Q12766 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.52□□□□□ -2.01
HMGXB3Q12766 SNORD116-26-201ENST00000516006 96 ntBASIC2.52□□□□□ -2.01
HMGXB3Q12766 AC011604.1-201ENST00000545978 196 ntBASIC2.52□□□□□ -2.01
HMGXB3Q12766 MTATP6P3-201ENST00000581686 676 ntBASIC2.52□□□□□ -2.01
HMGXB3Q12766 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
HMGXB3Q12766 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
HMGXB3Q12766 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HMGXB3Q12766 Y_RNA.36-201ENST00000362602 112 ntBASIC2.51□□□□□ -2.01
HMGXB3Q12766 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
HMGXB3Q12766 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.51□□□□□ -2.01
HMGXB3Q12766 Z85994.2-201ENST00000434327 452 ntBASIC2.51□□□□□ -2.01
HMGXB3Q12766 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.51□□□□□ -2.01
HMGXB3Q12766 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.51□□□□□ -2.01
HMGXB3Q12766 AC104115.2-201ENST00000523026 687 ntBASIC2.51□□□□□ -2.01
HMGXB3Q12766 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.51□□□□□ -2.01
HMGXB3Q12766 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.51□□□□□ -2.01
HMGXB3Q12766 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
HMGXB3Q12766 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.5□□□□□ -2.01
HMGXB3Q12766 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms