Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.28□□□□□ -1.88
GABPAQ06546 AC090425.2-201ENST00000608818 501 ntBASIC3.28□□□□□ -1.88
GABPAQ06546 AC006023.2-201ENST00000609916 167 ntBASIC3.28□□□□□ -1.88
GABPAQ06546 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.28□□□□□ -1.88
GABPAQ06546 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
GABPAQ06546 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
GABPAQ06546 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.28□□□□□ -1.88
GABPAQ06546 AL022578.1-201ENST00000439330 1433 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
GABPAQ06546 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
GABPAQ06546 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.27□□□□□ -1.89
GABPAQ06546 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
GABPAQ06546 RNU6-952P-201ENST00000391164 108 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.27□□□□□ -1.89
GABPAQ06546 RNA5SP129-201ENST00000410276 118 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
GABPAQ06546 MRPL50P2-201ENST00000416821 482 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.27□□□□□ -1.89
GABPAQ06546 RPL7P30-201ENST00000420888 709 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.27□□□□□ -1.89
GABPAQ06546 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.27□□□□□ -1.89
GABPAQ06546 MTCYBP45-201ENST00000435243 565 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 RPS29P6-201ENST00000438196 145 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 AL513043.1-201ENST00000439124 535 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
GABPAQ06546 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.27□□□□□ -1.89
GABPAQ06546 AC104090.1-201ENST00000506341 1171 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.27□□□□□ -1.89
GABPAQ06546 HMGB3P15-201ENST00000507326 574 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
GABPAQ06546 KLHL2P1-201ENST00000508691 521 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 MTCO2P32-201ENST00000514865 403 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 RN7SKP265-201ENST00000516448 223 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.27□□□□□ -1.89
GABPAQ06546 AC007954.1-201ENST00000554198 494 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.27□□□□□ -1.89
GABPAQ06546 VN1R82P-201ENST00000601481 356 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 AL031176.1-201ENST00000604554 466 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 AL390208.1-201ENST00000605885 644 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 OR2AS2P-201ENST00000606902 342 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 AC010338.1-201ENST00000621823 717 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 AL356585.4-201ENST00000623078 1229 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 CRYM-AS1-204ENST00000637983 556 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
GABPAQ06546 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
GABPAQ06546 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.27□□□□□ -1.89
GABPAQ06546 ZNF826P-207ENST00000622273 1910 ntBASIC3.27□□□□□ -1.89
GABPAQ06546 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.26□□□□□ -1.89
GABPAQ06546 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.26□□□□□ -1.89
GABPAQ06546 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
GABPAQ06546 AC092326.2-201ENST00000624772 1561 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 AC005183.1-201ENST00000603687 1979 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
GABPAQ06546 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
GABPAQ06546 FAM133CP-201ENST00000332869 704 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 AL356131.1-201ENST00000405826 414 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.26□□□□□ -1.89
GABPAQ06546 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.26□□□□□ -1.89
GABPAQ06546 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.26□□□□□ -1.89
GABPAQ06546 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
GABPAQ06546 AC099677.1-201ENST00000420575 175 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 MTCO2P17-201ENST00000424336 677 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.26□□□□□ -1.89
GABPAQ06546 SDCBPP1-201ENST00000440192 890 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 Z73417.1-201ENST00000447373 778 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 ARPC3P5-201ENST00000448802 534 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.26□□□□□ -1.89
GABPAQ06546 AL353691.1-201ENST00000451332 387 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.26□□□□□ -1.89
GABPAQ06546 Z82190.1-201ENST00000454534 490 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 BX322784.1-201ENST00000455793 1077 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 AC003982.1-202ENST00000469928 248 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.26□□□□□ -1.89
GABPAQ06546 AC096751.1-202ENST00000502691 1067 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.26□□□□□ -1.89
GABPAQ06546 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
GABPAQ06546 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
GABPAQ06546 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
GABPAQ06546 AC018630.1-201ENST00000541376 925 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 CR383656.7-201ENST00000548164 174 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 SETP7-201ENST00000552169 453 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.26□□□□□ -1.89
GABPAQ06546 AC234772.3-201ENST00000602277 528 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 NRBF2P5-201ENST00000603087 788 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 AL035413.2-201ENST00000604801 525 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 AC107952.2-201ENST00000606048 486 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.26□□□□□ -1.89
GABPAQ06546 AC099778.2-201ENST00000610904 211 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.26□□□□□ -1.89
GABPAQ06546 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.26□□□□□ -1.89
GABPAQ06546 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
GABPAQ06546 OR4G11P-202ENST00000642116 1414 ntBASIC3.26□□□□□ -1.89
GABPAQ06546 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
GABPAQ06546 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
GABPAQ06546 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.25□□□□□ -1.89
GABPAQ06546 AC009487.2-201ENST00000420969 6821 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
GABPAQ06546 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
GABPAQ06546 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms