Protein–RNA interactions for Protein: Q01955

COL4A3, Collagen alpha-3(IV) chain, humanhuman

Predictions only

Length 1,670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3Q01955 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
COL4A3Q01955 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
COL4A3Q01955 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
COL4A3Q01955 MIR183-201ENST00000384958 110 ntBASIC4.15□□□□□ -1.75
COL4A3Q01955 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL4A3Q01955 RPL5P18-201ENST00000406671 891 ntBASIC4.15□□□□□ -1.75
COL4A3Q01955 GSTM3P2-201ENST00000412746 530 ntBASIC4.15□□□□□ -1.75
COL4A3Q01955 NDUFB4P5-201ENST00000415445 361 ntBASIC4.15□□□□□ -1.75
COL4A3Q01955 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL4A3Q01955 AL451054.2-201ENST00000420896 202 ntBASIC4.15□□□□□ -1.75
COL4A3Q01955 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL4A3Q01955 ERLEC1P1-201ENST00000433806 578 ntBASIC4.15□□□□□ -1.75
COL4A3Q01955 AC083863.1-201ENST00000438811 231 ntBASIC4.15□□□□□ -1.75
COL4A3Q01955 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL4A3Q01955 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.15□□□□□ -1.75
COL4A3Q01955 PPIAP3-201ENST00000450588 505 ntBASIC4.15□□□□□ -1.75
COL4A3Q01955 AL163540.1-201ENST00000485382 386 ntBASIC4.15□□□□□ -1.75
COL4A3Q01955 RN7SL323P-201ENST00000494712 295 ntBASIC4.15□□□□□ -1.75
COL4A3Q01955 RPL29P14-201ENST00000495837 428 ntBASIC4.15□□□□□ -1.75
COL4A3Q01955 KLHL2P1-201ENST00000508691 521 ntBASIC4.15□□□□□ -1.75
COL4A3Q01955 AC093853.1-201ENST00000515689 483 ntBASIC4.15□□□□□ -1.75
COL4A3Q01955 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.15□□□□□ -1.75
COL4A3Q01955 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.15□□□□□ -1.75
COL4A3Q01955 SCOCP1-201ENST00000554676 349 ntBASIC4.15□□□□□ -1.75
COL4A3Q01955 AC040896.1-201ENST00000613819 479 ntBASIC4.15□□□□□ -1.75
COL4A3Q01955 AC084781.2-201ENST00000615568 161 ntBASIC4.15□□□□□ -1.75
COL4A3Q01955 AL359757.2-201ENST00000624309 274 ntBASIC4.15□□□□□ -1.75
COL4A3Q01955 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.15□□□□□ -1.75
COL4A3Q01955 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL4A3Q01955 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL4A3Q01955 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
COL4A3Q01955 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL4A3Q01955 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL4A3Q01955 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL4A3Q01955 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL4A3Q01955 AC009229.4-201ENST00000623854 1947 ntBASIC4.14□□□□□ -1.75
COL4A3Q01955 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
COL4A3Q01955 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
COL4A3Q01955 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
COL4A3Q01955 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL4A3Q01955 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL4A3Q01955 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL4A3Q01955 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL4A3Q01955 SNORA33.2-201ENST00000365413 134 ntBASIC4.14□□□□□ -1.75
COL4A3Q01955 Y_RNA.373-201ENST00000365600 103 ntBASIC4.14□□□□□ -1.75
COL4A3Q01955 SNORD37.1-201ENST00000390968 65 ntBASIC4.14□□□□□ -1.75
COL4A3Q01955 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
COL4A3Q01955 Y_RNA.615-201ENST00000410769 117 ntBASIC4.14□□□□□ -1.75
COL4A3Q01955 SYF2P2-201ENST00000417620 583 ntBASIC4.14□□□□□ -1.75
COL4A3Q01955 MTND3P2-201ENST00000438452 342 ntBASIC4.14□□□□□ -1.75
COL4A3Q01955 PLGLA-201ENST00000465668 449 ntBASIC4.14□□□□□ -1.75
COL4A3Q01955 AC055855.1-201ENST00000489563 579 ntBASIC4.14□□□□□ -1.75
COL4A3Q01955 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.14□□□□□ -1.75
COL4A3Q01955 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.14□□□□□ -1.75
COL4A3Q01955 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.14□□□□□ -1.75
COL4A3Q01955 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL4A3Q01955 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.14□□□□□ -1.75
COL4A3Q01955 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.14□□□□□ -1.75
COL4A3Q01955 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.14□□□□□ -1.75
COL4A3Q01955 AC018552.3-201ENST00000567416 561 ntBASIC4.14□□□□□ -1.75
COL4A3Q01955 AC006116.10-201ENST00000591836 581 ntBASIC4.14□□□□□ -1.75
COL4A3Q01955 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.14□□□□□ -1.75
COL4A3Q01955 SNRPGP17-201ENST00000603780 214 ntBASIC4.14□□□□□ -1.75
COL4A3Q01955 AC006363.1-201ENST00000603806 463 ntBASIC4.14□□□□□ -1.75
COL4A3Q01955 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.14□□□□□ -1.75
COL4A3Q01955 U6.105-201ENST00000637379 88 ntBASIC4.14□□□□□ -1.75
COL4A3Q01955 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.14□□□□□ -1.75
COL4A3Q01955 XPOTP1-201ENST00000443317 2398 ntBASIC4.14□□□□□ -1.75
COL4A3Q01955 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.14□□□□□ -1.75
COL4A3Q01955 YES1-203ENST00000577961 4554 ntTSL 5 BASIC4.14□□□□□ -1.75
COL4A3Q01955 ASNSP3-201ENST00000451989 1306 ntBASIC4.14□□□□□ -1.75
COL4A3Q01955 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL4A3Q01955 AC112198.2-201ENST00000426589 6996 ntBASIC4.14□□□□□ -1.75
COL4A3Q01955 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL4A3Q01955 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
COL4A3Q01955 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL4A3Q01955 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
COL4A3Q01955 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
COL4A3Q01955 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.14□□□□□ -1.75
COL4A3Q01955 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL4A3Q01955 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.13□□□□□ -1.75
COL4A3Q01955 AL355596.1-201ENST00000565399 3996 ntBASIC4.13□□□□□ -1.75
COL4A3Q01955 AC067945.1-201ENST00000342609 618 ntBASIC4.13□□□□□ -1.75
COL4A3Q01955 RNU4-48P-201ENST00000365559 182 ntBASIC4.13□□□□□ -1.75
COL4A3Q01955 Y_RNA.459-201ENST00000384251 102 ntBASIC4.13□□□□□ -1.75
COL4A3Q01955 MTCYBP8-201ENST00000422855 651 ntBASIC4.13□□□□□ -1.75
COL4A3Q01955 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL4A3Q01955 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.13□□□□□ -1.75
COL4A3Q01955 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.13□□□□□ -1.75
COL4A3Q01955 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.13□□□□□ -1.75
COL4A3Q01955 TRBV26-201ENST00000456572 344 ntBASIC4.13□□□□□ -1.75
COL4A3Q01955 GMFBP1-201ENST00000467831 427 ntBASIC4.13□□□□□ -1.75
COL4A3Q01955 AL139099.1-201ENST00000497398 403 ntBASIC4.13□□□□□ -1.75
COL4A3Q01955 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.13□□□□□ -1.75
COL4A3Q01955 AC018797.3-201ENST00000513388 1241 ntBASIC4.13□□□□□ -1.75
COL4A3Q01955 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.13□□□□□ -1.75
COL4A3Q01955 Y_RNA.718-201ENST00000517110 102 ntBASIC4.13□□□□□ -1.75
COL4A3Q01955 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.13□□□□□ -1.75
COL4A3Q01955 AC018442.3-201ENST00000523025 183 ntBASIC4.13□□□□□ -1.75
COL4A3Q01955 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms