Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3□□□□□ -1.93
PAX9P55771 AC087241.4-201ENST00000612441 480 ntBASIC3□□□□□ -1.93
PAX9P55771 AC013476.2-201ENST00000614456 459 ntBASIC3□□□□□ -1.93
PAX9P55771 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3□□□□□ -1.93
PAX9P55771 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3□□□□□ -1.93
PAX9P55771 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3□□□□□ -1.93
PAX9P55771 MTND5P29-201ENST00000458676 1807 ntBASIC3□□□□□ -1.93
PAX9P55771 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3□□□□□ -1.93
PAX9P55771 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
PAX9P55771 AC092326.2-201ENST00000624772 1561 ntBASIC3□□□□□ -1.93
PAX9P55771 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.99□□□□□ -1.93
PAX9P55771 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.99□□□□□ -1.93
PAX9P55771 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PAX9P55771 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
PAX9P55771 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PAX9P55771 RPL32P3-201ENST00000359025 275 ntBASIC2.99□□□□□ -1.93
PAX9P55771 Y_RNA.3-201ENST00000362331 103 ntBASIC2.99□□□□□ -1.93
PAX9P55771 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PAX9P55771 EI24P2-201ENST00000397776 1076 ntBASIC2.99□□□□□ -1.93
PAX9P55771 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.99□□□□□ -1.93
PAX9P55771 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC2.99□□□□□ -1.93
PAX9P55771 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.99□□□□□ -1.93
PAX9P55771 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.99□□□□□ -1.93
PAX9P55771 HMGB3P20-201ENST00000417997 600 ntBASIC2.99□□□□□ -1.93
PAX9P55771 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.99□□□□□ -1.93
PAX9P55771 AC007283.2-201ENST00000424739 197 ntBASIC2.99□□□□□ -1.93
PAX9P55771 AL158071.1-201ENST00000430315 461 ntBASIC2.99□□□□□ -1.93
PAX9P55771 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.99□□□□□ -1.93
PAX9P55771 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.99□□□□□ -1.93
PAX9P55771 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
PAX9P55771 AC004866.2-201ENST00000438285 481 ntBASIC2.99□□□□□ -1.93
PAX9P55771 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC2.99□□□□□ -1.93
PAX9P55771 HMGB1P12-201ENST00000438594 598 ntBASIC2.99□□□□□ -1.93
PAX9P55771 AC073614.1-201ENST00000438690 650 ntBASIC2.99□□□□□ -1.93
PAX9P55771 DNAJC19P4-201ENST00000440115 345 ntBASIC2.99□□□□□ -1.93
PAX9P55771 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.99□□□□□ -1.93
PAX9P55771 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.99□□□□□ -1.93
PAX9P55771 NUTF2P3-201ENST00000448540 384 ntBASIC2.99□□□□□ -1.93
PAX9P55771 AC079448.1-201ENST00000449377 373 ntBASIC2.99□□□□□ -1.93
PAX9P55771 AC009220.1-201ENST00000451614 275 ntBASIC2.99□□□□□ -1.93
PAX9P55771 MTCYBP1-201ENST00000454315 1119 ntBASIC2.99□□□□□ -1.93
PAX9P55771 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.99□□□□□ -1.93
PAX9P55771 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.99□□□□□ -1.93
PAX9P55771 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.99□□□□□ -1.93
PAX9P55771 AC114967.1-201ENST00000504890 259 ntBASIC2.99□□□□□ -1.93
PAX9P55771 AC010587.1-201ENST00000505809 469 ntBASIC2.99□□□□□ -1.93
PAX9P55771 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.99□□□□□ -1.93
PAX9P55771 DUXAP2-201ENST00000519198 589 ntBASIC2.99□□□□□ -1.93
PAX9P55771 MRPL49P2-201ENST00000521066 465 ntBASIC2.99□□□□□ -1.93
PAX9P55771 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.99□□□□□ -1.93
PAX9P55771 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.99□□□□□ -1.93
PAX9P55771 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC2.99□□□□□ -1.93
PAX9P55771 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.99□□□□□ -1.93
PAX9P55771 TGIF1P1-201ENST00000558095 802 ntBASIC2.99□□□□□ -1.93
PAX9P55771 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.99□□□□□ -1.93
PAX9P55771 AL845331.3-202ENST00000562856 261 ntBASIC2.99□□□□□ -1.93
PAX9P55771 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.99□□□□□ -1.93
PAX9P55771 AC068790.6-201ENST00000602558 258 ntBASIC2.99□□□□□ -1.93
PAX9P55771 DUXAP4-201ENST00000603046 613 ntBASIC2.99□□□□□ -1.93
PAX9P55771 AC004492.1-201ENST00000607036 742 ntBASIC2.99□□□□□ -1.93
PAX9P55771 AC004908.2-201ENST00000609090 574 ntBASIC2.99□□□□□ -1.93
PAX9P55771 AL590282.1-201ENST00000610379 1136 ntBASIC2.99□□□□□ -1.93
PAX9P55771 MIR6716-201ENST00000613413 80 ntBASIC2.99□□□□□ -1.93
PAX9P55771 MLECP1-201ENST00000615893 709 ntBASIC2.99□□□□□ -1.93
PAX9P55771 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PAX9P55771 MIR6758-201ENST00000620653 63 ntBASIC2.99□□□□□ -1.93
PAX9P55771 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.99□□□□□ -1.93
PAX9P55771 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.99□□□□□ -1.93
PAX9P55771 AL732372.2-225ENST00000642124 456 ntBASIC2.99□□□□□ -1.93
PAX9P55771 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PAX9P55771 AC092447.7-201ENST00000422212 1621 ntBASIC2.99□□□□□ -1.93
PAX9P55771 AC116096.1-201ENST00000566804 2314 ntBASIC2.99□□□□□ -1.93
PAX9P55771 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
PAX9P55771 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
PAX9P55771 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.99□□□□□ -1.93
PAX9P55771 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PAX9P55771 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PAX9P55771 AP001350.1-201ENST00000601906 1524 ntBASIC2.98□□□□□ -1.93
PAX9P55771 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PAX9P55771 AC118273.1-201ENST00000525324 3006 ntBASIC2.98□□□□□ -1.93
PAX9P55771 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
PAX9P55771 AC009812.4-201ENST00000569134 1805 ntBASIC2.98□□□□□ -1.93
PAX9P55771 IDE-202ENST00000371581 4480 ntTSL 2 BASIC2.98□□□□□ -1.93
PAX9P55771 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PAX9P55771 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
PAX9P55771 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PAX9P55771 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PAX9P55771 MIR30E-201ENST00000362104 92 ntBASIC2.98□□□□□ -1.93
PAX9P55771 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
PAX9P55771 RNU6-259P-201ENST00000383999 107 ntBASIC2.98□□□□□ -1.93
PAX9P55771 RNA5SP424-201ENST00000390988 115 ntBASIC2.98□□□□□ -1.93
PAX9P55771 Y_RNA.582-201ENST00000391023 95 ntBASIC2.98□□□□□ -1.93
PAX9P55771 RPL23AP32-201ENST00000395315 459 ntBASIC2.98□□□□□ -1.93
PAX9P55771 HMGN1P24-201ENST00000412282 298 ntBASIC2.98□□□□□ -1.93
PAX9P55771 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PAX9P55771 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PAX9P55771 PPP1R11P2-201ENST00000423543 382 ntBASIC2.98□□□□□ -1.93
PAX9P55771 DUTP6-201ENST00000425573 462 ntBASIC2.98□□□□□ -1.93
PAX9P55771 AL691449.1-201ENST00000426570 421 ntBASIC2.98□□□□□ -1.93
PAX9P55771 C4BPAP2-201ENST00000428434 478 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms