Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 RNU6-463P-201ENST00000384340 107 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 MIR1-2-201ENST00000384961 85 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
FOXG1P55316 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
FOXG1P55316 HMGB1P17-201ENST00000403495 628 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 PRRC2CP1-201ENST00000404428 159 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 RPL5P18-201ENST00000406671 891 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.62□□□□□ -1.83
FOXG1P55316 TPMTP2-201ENST00000414372 726 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 PDSS1P1-201ENST00000422953 1114 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 DUTP6-201ENST00000425573 462 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.62□□□□□ -1.83
FOXG1P55316 AL358472.1-201ENST00000431295 329 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 AC010881.1-201ENST00000433830 235 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 AC108059.2-201ENST00000434626 151 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXG1P55316 TBCAP1-201ENST00000436520 327 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXG1P55316 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.62□□□□□ -1.83
FOXG1P55316 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXG1P55316 RNU6-329P-201ENST00000459618 107 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 RPL23AP2-201ENST00000471227 466 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXG1P55316 AC090096.1-201ENST00000489168 390 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 RN7SL604P-201ENST00000492589 296 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXG1P55316 AC093677.1-201ENST00000514414 678 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXG1P55316 Y_RNA.691-201ENST00000516611 103 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 SNORD60.2-201ENST00000516883 86 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXG1P55316 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.62□□□□□ -1.83
FOXG1P55316 AC026464.5-201ENST00000562497 722 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.62□□□□□ -1.83
FOXG1P55316 RPL23AP87-202ENST00000573039 466 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 LARP7P2-201ENST00000575306 125 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.62□□□□□ -1.83
FOXG1P55316 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.62□□□□□ -1.83
FOXG1P55316 AC011468.4-201ENST00000603942 409 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 AC004853.1-201ENST00000604902 698 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.62□□□□□ -1.83
FOXG1P55316 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.62□□□□□ -1.83
FOXG1P55316 AL132822.1-201ENST00000617063 513 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 AC091953.2-201ENST00000623979 160 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.62□□□□□ -1.83
FOXG1P55316 AL133216.2-202ENST00000634512 349 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
FOXG1P55316 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
FOXG1P55316 SAGE4P-201ENST00000442271 3381 ntBASIC3.62□□□□□ -1.83
FOXG1P55316 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
FOXG1P55316 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.62□□□□□ -1.83
FOXG1P55316 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
FOXG1P55316 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.62□□□□□ -1.83
FOXG1P55316 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
FOXG1P55316 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
FOXG1P55316 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
FOXG1P55316 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
FOXG1P55316 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.61□□□□□ -1.83
FOXG1P55316 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.61□□□□□ -1.83
FOXG1P55316 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
FOXG1P55316 SPRR2C-201ENST00000290702 219 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 Y_RNA.231-201ENST00000364358 102 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 RNA5SP283-201ENST00000365604 119 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 RPL21P65-201ENST00000406094 466 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 RNA5SP239-201ENST00000410218 129 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 RNU2-62P-201ENST00000410868 191 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 AL160275.2-201ENST00000412010 394 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.61□□□□□ -1.83
FOXG1P55316 AC245054.2-201ENST00000415639 319 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 AC009161.1-201ENST00000417306 376 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 NCOR1P3-201ENST00000420479 303 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.61□□□□□ -1.83
FOXG1P55316 AL353777.1-201ENST00000425552 326 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 Z82205.1-201ENST00000428456 297 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXG1P55316 GTF2IP13-201ENST00000438487 386 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.61□□□□□ -1.83
FOXG1P55316 AC002381.1-201ENST00000447049 280 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 PPP1R2P5-201ENST00000457256 603 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 Y_RNA.631-201ENST00000459607 101 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 AL163540.1-201ENST00000485382 386 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXG1P55316 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.61□□□□□ -1.83
FOXG1P55316 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXG1P55316 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXG1P55316 NPM1P41-201ENST00000512920 831 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.61□□□□□ -1.83
FOXG1P55316 AC104986.1-201ENST00000517978 436 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.61□□□□□ -1.83
FOXG1P55316 AC022616.3-201ENST00000523940 148 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 AC135001.1-201ENST00000544546 283 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXG1P55316 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.61□□□□□ -1.83
FOXG1P55316 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.61□□□□□ -1.83
FOXG1P55316 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.61□□□□□ -1.83
FOXG1P55316 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXG1P55316 FRG2DP-202ENST00000566967 323 ntBASIC3.61□□□□□ -1.83
FOXG1P55316 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
FOXG1P55316 MIR3668-201ENST00000582138 75 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms