Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC063950.1-201ENST00000552036 308 ntBASIC4.81□□□□□ -1.64
MRE11P49959 AC007038.2-201ENST00000608095 740 ntBASIC4.81□□□□□ -1.64
MRE11P49959 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.81□□□□□ -1.64
MRE11P49959 AC009159.1-201ENST00000618386 642 ntBASIC4.81□□□□□ -1.64
MRE11P49959 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.81□□□□□ -1.64
MRE11P49959 AC007546.1-201ENST00000619452 559 ntBASIC4.81□□□□□ -1.64
MRE11P49959 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.81□□□□□ -1.64
MRE11P49959 AC010149.2-201ENST00000637608 315 ntBASIC4.81□□□□□ -1.64
MRE11P49959 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.81□□□□□ -1.64
MRE11P49959 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
MRE11P49959 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MRE11P49959 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
MRE11P49959 MARK2P15-201ENST00000432204 2186 ntBASIC4.81□□□□□ -1.64
MRE11P49959 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.81□□□□□ -1.64
MRE11P49959 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
MRE11P49959 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MRE11P49959 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
MRE11P49959 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.8□□□□□ -1.64
MRE11P49959 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
MRE11P49959 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
MRE11P49959 Y_RNA.86-201ENST00000363020 111 ntBASIC4.8□□□□□ -1.64
MRE11P49959 RNY3P3-201ENST00000363816 102 ntBASIC4.8□□□□□ -1.64
MRE11P49959 RNU1-39P-201ENST00000383897 165 ntBASIC4.8□□□□□ -1.64
MRE11P49959 AC016769.3-201ENST00000396562 315 ntBASIC4.8□□□□□ -1.64
MRE11P49959 MRPL42P2-201ENST00000403169 426 ntBASIC4.8□□□□□ -1.64
MRE11P49959 AL023807.1-201ENST00000407932 359 ntBASIC4.8□□□□□ -1.64
MRE11P49959 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.8□□□□□ -1.64
MRE11P49959 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.8□□□□□ -1.64
MRE11P49959 AL353777.1-201ENST00000425552 326 ntBASIC4.8□□□□□ -1.64
MRE11P49959 AC008850.1-201ENST00000427546 362 ntBASIC4.8□□□□□ -1.64
MRE11P49959 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.8□□□□□ -1.64
MRE11P49959 RPL36P19-201ENST00000430744 301 ntBASIC4.8□□□□□ -1.64
MRE11P49959 GTF2IP20-201ENST00000431663 360 ntBASIC4.8□□□□□ -1.64
MRE11P49959 CEACAMP1-201ENST00000434624 1035 ntBASIC4.8□□□□□ -1.64
MRE11P49959 RPL23AP74-201ENST00000437246 471 ntBASIC4.8□□□□□ -1.64
MRE11P49959 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.8□□□□□ -1.64
MRE11P49959 AL133547.1-201ENST00000448546 220 ntBASIC4.8□□□□□ -1.64
MRE11P49959 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.8□□□□□ -1.64
MRE11P49959 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.8□□□□□ -1.64
MRE11P49959 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.8□□□□□ -1.64
MRE11P49959 RPL39P36-201ENST00000490784 156 ntBASIC4.8□□□□□ -1.64
MRE11P49959 AP001025.2-201ENST00000490908 477 ntBASIC4.8□□□□□ -1.64
MRE11P49959 AL132838.2-201ENST00000492041 314 ntBASIC4.8□□□□□ -1.64
MRE11P49959 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.8□□□□□ -1.64
MRE11P49959 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.8□□□□□ -1.64
MRE11P49959 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.8□□□□□ -1.64
MRE11P49959 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.8□□□□□ -1.64
MRE11P49959 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.8□□□□□ -1.64
MRE11P49959 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.8□□□□□ -1.64
MRE11P49959 MIR4644-201ENST00000579929 84 ntBASIC4.8□□□□□ -1.64
MRE11P49959 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.8□□□□□ -1.64
MRE11P49959 AC078795.3-201ENST00000602913 472 ntBASIC4.8□□□□□ -1.64
MRE11P49959 AC064836.2-201ENST00000609491 462 ntBASIC4.8□□□□□ -1.64
MRE11P49959 AC068722.2-201ENST00000618734 544 ntBASIC4.8□□□□□ -1.64
MRE11P49959 AC006504.8-201ENST00000621046 635 ntBASIC4.8□□□□□ -1.64
MRE11P49959 AL357559.1-201ENST00000622228 274 ntBASIC4.8□□□□□ -1.64
MRE11P49959 AC073346.2-201ENST00000624724 2058 ntBASIC4.8□□□□□ -1.64
MRE11P49959 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
MRE11P49959 NUP58P1-201ENST00000502546 1738 ntBASIC4.8□□□□□ -1.64
MRE11P49959 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MRE11P49959 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.79□□□□□ -1.64
MRE11P49959 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
MRE11P49959 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
MRE11P49959 Y_RNA.142-201ENST00000363491 102 ntBASIC4.79□□□□□ -1.64
MRE11P49959 SNORA71.2-201ENST00000364941 134 ntBASIC4.79□□□□□ -1.64
MRE11P49959 Y_RNA.529-201ENST00000384586 119 ntBASIC4.79□□□□□ -1.64
MRE11P49959 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
MRE11P49959 MIR1183-201ENST00000408856 89 ntBASIC4.79□□□□□ -1.64
MRE11P49959 AC078974.1-201ENST00000411597 223 ntBASIC4.79□□□□□ -1.64
MRE11P49959 RPS20P15-201ENST00000412792 311 ntBASIC4.79□□□□□ -1.64
MRE11P49959 SDCBPP3-201ENST00000419629 891 ntBASIC4.79□□□□□ -1.64
MRE11P49959 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.79□□□□□ -1.64
MRE11P49959 FDX1P2-201ENST00000450769 375 ntBASIC4.79□□□□□ -1.64
MRE11P49959 RPS27AP1-201ENST00000475545 471 ntBASIC4.79□□□□□ -1.64
MRE11P49959 RN7SL812P-201ENST00000493791 279 ntBASIC4.79□□□□□ -1.64
MRE11P49959 AC034222.1-201ENST00000494052 532 ntBASIC4.79□□□□□ -1.64
MRE11P49959 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
MRE11P49959 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
MRE11P49959 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.79□□□□□ -1.64
MRE11P49959 NPM1P41-201ENST00000512920 831 ntBASIC4.79□□□□□ -1.64
MRE11P49959 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.79□□□□□ -1.64
MRE11P49959 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.79□□□□□ -1.64
MRE11P49959 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.79□□□□□ -1.64
MRE11P49959 AC022861.1-201ENST00000522981 663 ntBASIC4.79□□□□□ -1.64
MRE11P49959 DEFB109D-201ENST00000529497 240 ntBASIC4.79□□□□□ -1.64
MRE11P49959 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.79□□□□□ -1.64
MRE11P49959 ARL2BPP2-201ENST00000550907 489 ntBASIC4.79□□□□□ -1.64
MRE11P49959 LSM6P2-201ENST00000552208 177 ntBASIC4.79□□□□□ -1.64
MRE11P49959 AC037471.2-201ENST00000564941 598 ntBASIC4.79□□□□□ -1.64
MRE11P49959 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.79□□□□□ -1.64
MRE11P49959 AC099489.2-201ENST00000574976 260 ntBASIC4.79□□□□□ -1.64
MRE11P49959 AC104662.1-201ENST00000604448 511 ntBASIC4.79□□□□□ -1.64
MRE11P49959 OR10AB1P-201ENST00000609613 938 ntBASIC4.79□□□□□ -1.64
MRE11P49959 BX664608.1-201ENST00000610519 487 ntBASIC4.79□□□□□ -1.64
MRE11P49959 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.79□□□□□ -1.64
MRE11P49959 AC126177.8-201ENST00000618339 1015 ntBASIC4.79□□□□□ -1.64
MRE11P49959 MIR3653-201ENST00000625572 110 ntBASIC4.79□□□□□ -1.64
MRE11P49959 AC140479.6-201ENST00000633535 357 ntBASIC4.79□□□□□ -1.64
MRE11P49959 AC024614.3-201ENST00000637860 256 ntBASIC4.79□□□□□ -1.64
MRE11P49959 AC004944.1-201ENST00000517807 3059 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms