Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 ATP5A1P2-202ENST00000616464 443 ntBASIC1.71□□□□□ -2.14
RPL28P46779 AC073308.1-201ENST00000623696 305 ntBASIC1.71□□□□□ -2.14
RPL28P46779 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.71□□□□□ -2.14
RPL28P46779 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.71□□□□□ -2.14
RPL28P46779 AP003399.1-201ENST00000637534 361 ntBASIC1.71□□□□□ -2.14
RPL28P46779 CRYM-AS1-204ENST00000637983 556 ntBASIC1.71□□□□□ -2.14
RPL28P46779 AL365361.1-201ENST00000566942 3481 ntBASIC1.71□□□□□ -2.14
RPL28P46779 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.71□□□□□ -2.14
RPL28P46779 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.71□□□□□ -2.14
RPL28P46779 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.71□□□□□ -2.14
RPL28P46779 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RPL28P46779 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
RPL28P46779 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.71□□□□□ -2.14
RPL28P46779 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
RPL28P46779 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.7□□□□□ -2.14
RPL28P46779 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
RPL28P46779 AC007336.1-201ENST00000576365 3828 ntBASIC1.7□□□□□ -2.14
RPL28P46779 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.7□□□□□ -2.14
RPL28P46779 ANKRD36BP1-201ENST00000358576 1779 ntBASIC1.7□□□□□ -2.14
RPL28P46779 AL049641.1-201ENST00000441055 1948 ntBASIC1.7□□□□□ -2.14
RPL28P46779 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RPL28P46779 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
RPL28P46779 Y_RNA.333-201ENST00000365274 102 ntBASIC1.7□□□□□ -2.14
RPL28P46779 AL122016.1-201ENST00000403365 367 ntBASIC1.7□□□□□ -2.14
RPL28P46779 U3.37-201ENST00000408528 213 ntBASIC1.7□□□□□ -2.14
RPL28P46779 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.7□□□□□ -2.14
RPL28P46779 AL357078.2-201ENST00000416486 427 ntBASIC1.7□□□□□ -2.14
RPL28P46779 SPA17P1-201ENST00000416656 452 ntBASIC1.7□□□□□ -2.14
RPL28P46779 AC099548.1-201ENST00000421443 426 ntBASIC1.7□□□□□ -2.14
RPL28P46779 MTCO3P1-205ENST00000422088 832 ntBASIC1.7□□□□□ -2.14
RPL28P46779 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.7□□□□□ -2.14
RPL28P46779 GTF2IP20-201ENST00000431663 360 ntBASIC1.7□□□□□ -2.14
RPL28P46779 AL512844.2-201ENST00000433990 593 ntBASIC1.7□□□□□ -2.14
RPL28P46779 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.7□□□□□ -2.14
RPL28P46779 FGF7P5-201ENST00000441829 291 ntBASIC1.7□□□□□ -2.14
RPL28P46779 RPL37P4-201ENST00000448908 268 ntBASIC1.7□□□□□ -2.14
RPL28P46779 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RPL28P46779 AL353691.1-201ENST00000451332 387 ntBASIC1.7□□□□□ -2.14
RPL28P46779 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.7□□□□□ -2.14
RPL28P46779 SUMO2P2-201ENST00000456482 255 ntBASIC1.7□□□□□ -2.14
RPL28P46779 MTND2P30-201ENST00000456663 382 ntBASIC1.7□□□□□ -2.14
RPL28P46779 MTND4LP3-201ENST00000468320 276 ntBASIC1.7□□□□□ -2.14
RPL28P46779 AC135721.1-201ENST00000497954 479 ntBASIC1.7□□□□□ -2.14
RPL28P46779 EIF4EP3-201ENST00000498782 656 ntBASIC1.7□□□□□ -2.14
RPL28P46779 BOLA3P3-201ENST00000505182 232 ntBASIC1.7□□□□□ -2.14
RPL28P46779 AC114322.1-201ENST00000506771 926 ntBASIC1.7□□□□□ -2.14
RPL28P46779 TTC39CP1-201ENST00000512513 755 ntBASIC1.7□□□□□ -2.14
RPL28P46779 AC100870.1-201ENST00000522035 505 ntBASIC1.7□□□□□ -2.14
RPL28P46779 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RPL28P46779 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.7□□□□□ -2.14
RPL28P46779 TRAV28-201ENST00000557548 323 ntBASIC1.7□□□□□ -2.14
RPL28P46779 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.7□□□□□ -2.14
RPL28P46779 AL731537.2-201ENST00000561565 951 ntBASIC1.7□□□□□ -2.14
RPL28P46779 LINC00557-201ENST00000563184 1279 ntBASIC1.7□□□□□ -2.14
RPL28P46779 AC124283.4-201ENST00000581815 456 ntBASIC1.7□□□□□ -2.14
RPL28P46779 MIR3117-201ENST00000584034 78 ntBASIC1.7□□□□□ -2.14
RPL28P46779 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.7□□□□□ -2.14
RPL28P46779 BNIP3P24-201ENST00000593398 557 ntBASIC1.7□□□□□ -2.14
RPL28P46779 AL022067.1-201ENST00000602426 454 ntBASIC1.7□□□□□ -2.14
RPL28P46779 AC092954.1-201ENST00000609121 445 ntBASIC1.7□□□□□ -2.14
RPL28P46779 AL592148.2-201ENST00000612210 372 ntBASIC1.7□□□□□ -2.14
RPL28P46779 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
RPL28P46779 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.7□□□□□ -2.14
RPL28P46779 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.7□□□□□ -2.14
RPL28P46779 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RPL28P46779 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RPL28P46779 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
RPL28P46779 AC022336.2-201ENST00000568966 2538 ntBASIC1.69□□□□□ -2.14
RPL28P46779 AL022578.1-201ENST00000439330 1433 ntBASIC1.69□□□□□ -2.14
RPL28P46779 AC093536.2-201ENST00000565257 1406 ntBASIC1.69□□□□□ -2.14
RPL28P46779 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.69□□□□□ -2.14
RPL28P46779 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RPL28P46779 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.69□□□□□ -2.14
RPL28P46779 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.69□□□□□ -2.14
RPL28P46779 MIR325-201ENST00000385260 98 ntBASIC1.69□□□□□ -2.14
RPL28P46779 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.69□□□□□ -2.14
RPL28P46779 UBA52P6-201ENST00000399822 382 ntBASIC1.69□□□□□ -2.14
RPL28P46779 AL356131.1-201ENST00000405826 414 ntBASIC1.69□□□□□ -2.14
RPL28P46779 SNORA11.1-201ENST00000408133 129 ntBASIC1.69□□□□□ -2.14
RPL28P46779 AC007064.1-201ENST00000412238 351 ntBASIC1.69□□□□□ -2.14
RPL28P46779 AC080125.1-201ENST00000414888 684 ntBASIC1.69□□□□□ -2.14
RPL28P46779 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.69□□□□□ -2.14
RPL28P46779 AL121882.1-201ENST00000422893 417 ntBASIC1.69□□□□□ -2.14
RPL28P46779 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RPL28P46779 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC1.69□□□□□ -2.14
RPL28P46779 AL356867.1-201ENST00000429623 299 ntBASIC1.69□□□□□ -2.14
RPL28P46779 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.69□□□□□ -2.14
RPL28P46779 RSL24D1P8-201ENST00000434442 492 ntBASIC1.69□□□□□ -2.14
RPL28P46779 AC112220.1-201ENST00000434628 355 ntBASIC1.69□□□□□ -2.14
RPL28P46779 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.69□□□□□ -2.14
RPL28P46779 THAP5P1-201ENST00000439089 262 ntBASIC1.69□□□□□ -2.14
RPL28P46779 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.69□□□□□ -2.14
RPL28P46779 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.69□□□□□ -2.14
RPL28P46779 AC112653.1-201ENST00000443851 386 ntBASIC1.69□□□□□ -2.14
RPL28P46779 BMI1P1-201ENST00000445879 941 ntBASIC1.69□□□□□ -2.14
RPL28P46779 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.69□□□□□ -2.14
RPL28P46779 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.69□□□□□ -2.14
RPL28P46779 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RPL28P46779 CACYBPP2-201ENST00000453625 678 ntBASIC1.69□□□□□ -2.14
RPL28P46779 snoU13.22-201ENST00000459428 104 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms