Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.77□□□□□ -1.81
PTPN9P43378 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.77□□□□□ -1.81
PTPN9P43378 AC011825.1-201ENST00000484967 388 ntBASIC3.77□□□□□ -1.81
PTPN9P43378 AC114967.1-201ENST00000504890 259 ntBASIC3.77□□□□□ -1.81
PTPN9P43378 NDUFB4P2-201ENST00000509515 391 ntBASIC3.77□□□□□ -1.81
PTPN9P43378 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.77□□□□□ -1.81
PTPN9P43378 AC023141.12-201ENST00000512399 199 ntBASIC3.77□□□□□ -1.81
PTPN9P43378 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.77□□□□□ -1.81
PTPN9P43378 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
PTPN9P43378 SNORA18.6-201ENST00000516792 115 ntBASIC3.77□□□□□ -1.81
PTPN9P43378 MTCO2P4-201ENST00000517968 247 ntBASIC3.77□□□□□ -1.81
PTPN9P43378 AP004371.1-201ENST00000525240 214 ntBASIC3.77□□□□□ -1.81
PTPN9P43378 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN9P43378 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.77□□□□□ -1.81
PTPN9P43378 AC022880.1-201ENST00000534017 973 ntBASIC3.77□□□□□ -1.81
PTPN9P43378 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.77□□□□□ -1.81
PTPN9P43378 AC137800.2-201ENST00000574375 120 ntBASIC3.77□□□□□ -1.81
PTPN9P43378 MIR3186-201ENST00000577404 85 ntBASIC3.77□□□□□ -1.81
PTPN9P43378 AC006270.2-201ENST00000578523 652 ntBASIC3.77□□□□□ -1.81
PTPN9P43378 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.77□□□□□ -1.81
PTPN9P43378 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.77□□□□□ -1.81
PTPN9P43378 SNRPGP15-201ENST00000600149 222 ntBASIC3.77□□□□□ -1.81
PTPN9P43378 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.77□□□□□ -1.81
PTPN9P43378 DUXAP4-201ENST00000603046 613 ntBASIC3.77□□□□□ -1.81
PTPN9P43378 AC006077.1-201ENST00000604746 343 ntBASIC3.77□□□□□ -1.81
PTPN9P43378 AC072046.2-201ENST00000618366 268 ntBASIC3.77□□□□□ -1.81
PTPN9P43378 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.77□□□□□ -1.81
PTPN9P43378 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
PTPN9P43378 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN9P43378 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN9P43378 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
PTPN9P43378 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN9P43378 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTPN9P43378 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTPN9P43378 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PTPN9P43378 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.76□□□□□ -1.81
PTPN9P43378 GNG5P1-201ENST00000255500 204 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.76□□□□□ -1.81
PTPN9P43378 U8.3-201ENST00000363321 132 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 RNU5A-6P-201ENST00000384136 116 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 SNORD3H-201ENST00000384486 214 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 MIR19A-201ENST00000384878 82 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 RNU6-754P-201ENST00000391166 107 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 RN7SKP202-201ENST00000410439 330 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 HMGN1P24-201ENST00000412282 298 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 HMGB3P23-201ENST00000414981 585 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.76□□□□□ -1.81
PTPN9P43378 C1DP2-201ENST00000418167 426 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.76□□□□□ -1.81
PTPN9P43378 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.76□□□□□ -1.81
PTPN9P43378 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.76□□□□□ -1.81
PTPN9P43378 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PTPN9P43378 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.76□□□□□ -1.81
PTPN9P43378 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.76□□□□□ -1.81
PTPN9P43378 MTND1P12-201ENST00000455231 147 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.76□□□□□ -1.81
PTPN9P43378 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.76□□□□□ -1.81
PTPN9P43378 AL049830.2-201ENST00000480072 201 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
PTPN9P43378 HMGN1P11-201ENST00000508668 303 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.76□□□□□ -1.81
PTPN9P43378 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.76□□□□□ -1.81
PTPN9P43378 AP003392.2-201ENST00000527269 208 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PTPN9P43378 AC123904.2-201ENST00000548059 300 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.76□□□□□ -1.81
PTPN9P43378 AC126177.3-201ENST00000551839 688 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 AC010546.1-201ENST00000569391 485 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 MIR5047-201ENST00000579212 100 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 MTND1P15-201ENST00000579262 949 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 SNORD84-203ENST00000584275 78 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.76□□□□□ -1.81
PTPN9P43378 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.76□□□□□ -1.81
PTPN9P43378 AL158211.4-201ENST00000606988 584 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 AC004908.2-201ENST00000609090 574 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 AC005332.10-201ENST00000612725 619 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 AL121772.2-201ENST00000614331 297 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 AC091834.1-201ENST00000614543 472 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.76□□□□□ -1.81
PTPN9P43378 AL157700.1-201ENST00000561973 1432 ntBASIC3.76□□□□□ -1.81
PTPN9P43378 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
PTPN9P43378 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTPN9P43378 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPN9P43378 AC004925.1-201ENST00000624256 2706 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PTPN9P43378 SNORD9-201ENST00000362566 104 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 RNU5A-8P-201ENST00000364102 114 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 RNA5SP167-201ENST00000365461 116 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 RPL21P17-201ENST00000397467 475 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 MRPL42P2-201ENST00000403169 426 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 AL031779.1-201ENST00000415663 330 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 RAD23BP2-201ENST00000416003 1207 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.75□□□□□ -1.81
PTPN9P43378 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.75□□□□□ -1.81
PTPN9P43378 AC007389.2-201ENST00000434630 306 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPN9P43378 DNAJC19P4-201ENST00000440115 345 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 RAC1P7-201ENST00000445367 377 ntBASIC3.75□□□□□ -1.81
PTPN9P43378 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms