Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC012435.1-202ENST00000568772 240 ntBASIC3.61□□□□□ -1.83
HADHAP40939 COX6CP3-201ENST00000580869 223 ntBASIC3.61□□□□□ -1.83
HADHAP40939 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.61□□□□□ -1.83
HADHAP40939 AC068790.3-201ENST00000602988 553 ntBASIC3.61□□□□□ -1.83
HADHAP40939 AC006077.1-201ENST00000604746 343 ntBASIC3.61□□□□□ -1.83
HADHAP40939 AP000254.1-201ENST00000609934 520 ntBASIC3.61□□□□□ -1.83
HADHAP40939 RMST_8.1-201ENST00000610287 165 ntBASIC3.61□□□□□ -1.83
HADHAP40939 AC013476.2-201ENST00000614456 459 ntBASIC3.61□□□□□ -1.83
HADHAP40939 AC002076.2-201ENST00000617362 122 ntBASIC3.61□□□□□ -1.83
HADHAP40939 AC078883.4-201ENST00000623218 367 ntBASIC3.61□□□□□ -1.83
HADHAP40939 AL356266.1-201ENST00000623311 483 ntBASIC3.61□□□□□ -1.83
HADHAP40939 AC110801.1-201ENST00000623590 212 ntBASIC3.61□□□□□ -1.83
HADHAP40939 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.61□□□□□ -1.83
HADHAP40939 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.61□□□□□ -1.83
HADHAP40939 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.61□□□□□ -1.83
HADHAP40939 AC007656.2-201ENST00000624902 4547 ntBASIC3.61□□□□□ -1.83
HADHAP40939 AC068647.1-201ENST00000489539 2265 ntBASIC3.61□□□□□ -1.83
HADHAP40939 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HADHAP40939 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HADHAP40939 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HADHAP40939 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HADHAP40939 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HADHAP40939 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HADHAP40939 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HADHAP40939 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.6□□□□□ -1.83
HADHAP40939 MFSD8-233ENST00000641482 4860 ntBASIC3.6□□□□□ -1.83
HADHAP40939 RNA5SP119-201ENST00000362715 117 ntBASIC3.6□□□□□ -1.83
HADHAP40939 RNA5SP124-201ENST00000362739 110 ntBASIC3.6□□□□□ -1.83
HADHAP40939 Y_RNA.169-201ENST00000363745 96 ntBASIC3.6□□□□□ -1.83
HADHAP40939 SNORA5A-201ENST00000384111 134 ntBASIC3.6□□□□□ -1.83
HADHAP40939 RPL21P17-201ENST00000397467 475 ntBASIC3.6□□□□□ -1.83
HADHAP40939 AL109755.1-201ENST00000401791 649 ntBASIC3.6□□□□□ -1.83
HADHAP40939 ATP5A1P2-201ENST00000412323 255 ntBASIC3.6□□□□□ -1.83
HADHAP40939 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.6□□□□□ -1.83
HADHAP40939 AC068533.1-201ENST00000418542 415 ntBASIC3.6□□□□□ -1.83
HADHAP40939 AL035423.1-201ENST00000420331 213 ntBASIC3.6□□□□□ -1.83
HADHAP40939 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.6□□□□□ -1.83
HADHAP40939 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.6□□□□□ -1.83
HADHAP40939 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.6□□□□□ -1.83
HADHAP40939 AC006946.1-201ENST00000429106 328 ntBASIC3.6□□□□□ -1.83
HADHAP40939 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.6□□□□□ -1.83
HADHAP40939 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.6□□□□□ -1.83
HADHAP40939 MTND1P30-201ENST00000441241 901 ntBASIC3.6□□□□□ -1.83
HADHAP40939 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.6□□□□□ -1.83
HADHAP40939 PDSS1P2-201ENST00000449397 678 ntBASIC3.6□□□□□ -1.83
HADHAP40939 RNU7-59P-201ENST00000459101 61 ntBASIC3.6□□□□□ -1.83
HADHAP40939 AC004801.2-202ENST00000463559 283 ntBASIC3.6□□□□□ -1.83
HADHAP40939 AL049714.1-201ENST00000466686 347 ntBASIC3.6□□□□□ -1.83
HADHAP40939 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.6□□□□□ -1.83
HADHAP40939 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HADHAP40939 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.6□□□□□ -1.83
HADHAP40939 RN7SKP18-201ENST00000516005 275 ntBASIC3.6□□□□□ -1.83
HADHAP40939 RNU6-798P-201ENST00000516912 103 ntBASIC3.6□□□□□ -1.83
HADHAP40939 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.6□□□□□ -1.83
HADHAP40939 MTCO1P47-201ENST00000523889 1271 ntBASIC3.6□□□□□ -1.83
HADHAP40939 AC022690.1-201ENST00000526681 550 ntBASIC3.6□□□□□ -1.83
HADHAP40939 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.6□□□□□ -1.83
HADHAP40939 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HADHAP40939 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.6□□□□□ -1.83
HADHAP40939 OR4T1P-201ENST00000554933 911 ntBASIC3.6□□□□□ -1.83
HADHAP40939 AC109446.2-201ENST00000567872 497 ntBASIC3.6□□□□□ -1.83
HADHAP40939 AC135628.1-201ENST00000568867 534 ntBASIC3.6□□□□□ -1.83
HADHAP40939 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.6□□□□□ -1.83
HADHAP40939 AC024220.1-201ENST00000603675 484 ntBASIC3.6□□□□□ -1.83
HADHAP40939 AC025811.1-201ENST00000604312 472 ntBASIC3.6□□□□□ -1.83
HADHAP40939 AC092354.1-201ENST00000606057 376 ntBASIC3.6□□□□□ -1.83
HADHAP40939 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.6□□□□□ -1.83
HADHAP40939 ZNF285B-201ENST00000561698 1767 ntBASIC3.6□□□□□ -1.83
HADHAP40939 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HADHAP40939 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HADHAP40939 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HADHAP40939 AC093908.1-201ENST00000623125 8092 ntBASIC3.6□□□□□ -1.83
HADHAP40939 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HADHAP40939 AC103988.1-201ENST00000566382 2177 ntBASIC3.59□□□□□ -1.83
HADHAP40939 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HADHAP40939 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
HADHAP40939 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HADHAP40939 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.59□□□□□ -1.83
HADHAP40939 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HADHAP40939 SNORA71.3-201ENST00000362582 128 ntBASIC3.59□□□□□ -1.83
HADHAP40939 RNA5SP51-201ENST00000364750 119 ntBASIC3.59□□□□□ -1.83
HADHAP40939 SNORA73.2-201ENST00000364946 201 ntBASIC3.59□□□□□ -1.83
HADHAP40939 SNORA36C-201ENST00000384289 132 ntBASIC3.59□□□□□ -1.83
HADHAP40939 Y_RNA.560-201ENST00000384689 102 ntBASIC3.59□□□□□ -1.83
HADHAP40939 MIR184-201ENST00000384962 84 ntBASIC3.59□□□□□ -1.83
HADHAP40939 U3.42-201ENST00000408746 214 ntBASIC3.59□□□□□ -1.83
HADHAP40939 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.59□□□□□ -1.83
HADHAP40939 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.59□□□□□ -1.83
HADHAP40939 USP9YP26-201ENST00000421008 661 ntBASIC3.59□□□□□ -1.83
HADHAP40939 AC069157.1-201ENST00000421749 137 ntBASIC3.59□□□□□ -1.83
HADHAP40939 NDUFB4P7-201ENST00000423198 363 ntBASIC3.59□□□□□ -1.83
HADHAP40939 UBE2D3P2-201ENST00000424409 445 ntBASIC3.59□□□□□ -1.83
HADHAP40939 RPL7L1P10-201ENST00000427790 463 ntBASIC3.59□□□□□ -1.83
HADHAP40939 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.59□□□□□ -1.83
HADHAP40939 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HADHAP40939 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.59□□□□□ -1.83
HADHAP40939 BMI1P1-201ENST00000445879 941 ntBASIC3.59□□□□□ -1.83
HADHAP40939 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.59□□□□□ -1.83
HADHAP40939 TPT1P14-201ENST00000448018 505 ntBASIC3.59□□□□□ -1.83
HADHAP40939 AL162389.1-201ENST00000449233 177 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms