Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC087359.1-201ENST00000508335 1740 ntBASIC2.73□□□□□ -1.97
RORAP35398 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.73□□□□□ -1.97
RORAP35398 AL365361.1-201ENST00000566942 3481 ntBASIC2.73□□□□□ -1.97
RORAP35398 AC107982.1-201ENST00000507171 1300 ntBASIC2.73□□□□□ -1.97
RORAP35398 AL355143.1-201ENST00000407101 841 ntBASIC2.73□□□□□ -1.97
RORAP35398 AC007742.1-201ENST00000425789 329 ntBASIC2.73□□□□□ -1.97
RORAP35398 ELOCP26-201ENST00000436067 329 ntBASIC2.73□□□□□ -1.97
RORAP35398 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.73□□□□□ -1.97
RORAP35398 AC092427.1-201ENST00000439177 601 ntBASIC2.73□□□□□ -1.97
RORAP35398 AL162389.1-201ENST00000449233 177 ntBASIC2.73□□□□□ -1.97
RORAP35398 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.73□□□□□ -1.97
RORAP35398 AC005297.2-201ENST00000450430 606 ntBASIC2.73□□□□□ -1.97
RORAP35398 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.73□□□□□ -1.97
RORAP35398 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.73□□□□□ -1.97
RORAP35398 AC026410.2-201ENST00000460281 156 ntBASIC2.73□□□□□ -1.97
RORAP35398 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RORAP35398 RPL23AP11-201ENST00000475260 469 ntBASIC2.73□□□□□ -1.97
RORAP35398 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.73□□□□□ -1.97
RORAP35398 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RORAP35398 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.73□□□□□ -1.97
RORAP35398 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.73□□□□□ -1.97
RORAP35398 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RORAP35398 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.73□□□□□ -1.97
RORAP35398 RNU6-1225P-201ENST00000516336 65 ntBASIC2.73□□□□□ -1.97
RORAP35398 SETP7-201ENST00000552169 453 ntBASIC2.73□□□□□ -1.97
RORAP35398 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.73□□□□□ -1.97
RORAP35398 MTND3P13-201ENST00000574391 343 ntBASIC2.73□□□□□ -1.97
RORAP35398 AC011260.1-201ENST00000578420 472 ntBASIC2.73□□□□□ -1.97
RORAP35398 AC023043.3-201ENST00000593113 385 ntBASIC2.73□□□□□ -1.97
RORAP35398 AC008739.2-201ENST00000597006 317 ntBASIC2.73□□□□□ -1.97
RORAP35398 AC010620.2-201ENST00000600135 313 ntBASIC2.73□□□□□ -1.97
RORAP35398 ATP1B3P1-201ENST00000605365 821 ntBASIC2.73□□□□□ -1.97
RORAP35398 AC024257.5-201ENST00000612739 531 ntBASIC2.73□□□□□ -1.97
RORAP35398 AC084824.4-201ENST00000620106 731 ntBASIC2.73□□□□□ -1.97
RORAP35398 AC007998.5-201ENST00000622938 237 ntBASIC2.73□□□□□ -1.97
RORAP35398 AC004808.1-201ENST00000627671 721 ntBASIC2.73□□□□□ -1.97
RORAP35398 MIR6733-201ENST00000635723 61 ntBASIC2.73□□□□□ -1.97
RORAP35398 AC099654.8-201ENST00000637757 681 ntBASIC2.73□□□□□ -1.97
RORAP35398 MIR1322-201ENST00000638013 71 ntBASIC2.73□□□□□ -1.97
RORAP35398 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RORAP35398 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
RORAP35398 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.73□□□□□ -1.97
RORAP35398 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
RORAP35398 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.72□□□□□ -1.97
RORAP35398 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
RORAP35398 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.72□□□□□ -1.97
RORAP35398 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
RORAP35398 RNU1-109P-201ENST00000383960 147 ntBASIC2.72□□□□□ -1.97
RORAP35398 Y_RNA.472-201ENST00000384322 102 ntBASIC2.72□□□□□ -1.97
RORAP35398 DHFRP6-201ENST00000401776 268 ntBASIC2.72□□□□□ -1.97
RORAP35398 AL136372.1-201ENST00000403060 228 ntBASIC2.72□□□□□ -1.97
RORAP35398 RNU2-47P-201ENST00000410649 186 ntBASIC2.72□□□□□ -1.97
RORAP35398 AC019178.2-201ENST00000423595 505 ntBASIC2.72□□□□□ -1.97
RORAP35398 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.72□□□□□ -1.97
RORAP35398 RPS20P5-201ENST00000434808 360 ntBASIC2.72□□□□□ -1.97
RORAP35398 LSM1P1-201ENST00000438629 273 ntBASIC2.72□□□□□ -1.97
RORAP35398 USP9YP22-201ENST00000438971 294 ntBASIC2.72□□□□□ -1.97
RORAP35398 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.72□□□□□ -1.97
RORAP35398 RPL23AP20-201ENST00000447965 421 ntBASIC2.72□□□□□ -1.97
RORAP35398 NIPA2P5-201ENST00000452282 464 ntBASIC2.72□□□□□ -1.97
RORAP35398 AC069528.1-202ENST00000482888 637 ntBASIC2.72□□□□□ -1.97
RORAP35398 TMEM251P1-201ENST00000503717 318 ntBASIC2.72□□□□□ -1.97
RORAP35398 COX7A2P2-201ENST00000505291 250 ntBASIC2.72□□□□□ -1.97
RORAP35398 AC117522.3-201ENST00000507974 584 ntBASIC2.72□□□□□ -1.97
RORAP35398 RNU6-276P-201ENST00000516114 96 ntBASIC2.72□□□□□ -1.97
RORAP35398 RNA5SP76-201ENST00000516277 87 ntBASIC2.72□□□□□ -1.97
RORAP35398 AC091163.3-201ENST00000518269 1144 ntBASIC2.72□□□□□ -1.97
RORAP35398 MTND2P7-201ENST00000521337 640 ntBASIC2.72□□□□□ -1.97
RORAP35398 LRRC6P1-201ENST00000532188 885 ntBASIC2.72□□□□□ -1.97
RORAP35398 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.72□□□□□ -1.97
RORAP35398 HIGD1AP17-201ENST00000554576 276 ntBASIC2.72□□□□□ -1.97
RORAP35398 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.72□□□□□ -1.97
RORAP35398 AC138761.3-201ENST00000579993 334 ntBASIC2.72□□□□□ -1.97
RORAP35398 MIR3162-201ENST00000581818 82 ntBASIC2.72□□□□□ -1.97
RORAP35398 AL022099.1-201ENST00000604551 712 ntBASIC2.72□□□□□ -1.97
RORAP35398 AC069304.2-201ENST00000605154 435 ntBASIC2.72□□□□□ -1.97
RORAP35398 AC012443.1-201ENST00000605605 231 ntBASIC2.72□□□□□ -1.97
RORAP35398 AC018645.2-201ENST00000609151 472 ntBASIC2.72□□□□□ -1.97
RORAP35398 AL161629.2-201ENST00000615347 275 ntBASIC2.72□□□□□ -1.97
RORAP35398 AL121895.2-201ENST00000619558 447 ntBASIC2.72□□□□□ -1.97
RORAP35398 AL049777.1-201ENST00000622740 518 ntBASIC2.72□□□□□ -1.97
RORAP35398 OR4G11P-202ENST00000642116 1414 ntBASIC2.72□□□□□ -1.97
RORAP35398 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.72□□□□□ -1.97
RORAP35398 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RORAP35398 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.72□□□□□ -1.97
RORAP35398 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
RORAP35398 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.72□□□□□ -1.97
RORAP35398 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
RORAP35398 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RORAP35398 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RORAP35398 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RORAP35398 UBE2V1P2-201ENST00000397758 440 ntBASIC2.71□□□□□ -1.98
RORAP35398 MTND2P5-201ENST00000432656 1006 ntBASIC2.71□□□□□ -1.98
RORAP35398 AC087499.2-201ENST00000432861 149 ntBASIC2.71□□□□□ -1.98
RORAP35398 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.71□□□□□ -1.98
RORAP35398 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.71□□□□□ -1.98
RORAP35398 MUPP-201ENST00000438111 566 ntBASIC2.71□□□□□ -1.98
RORAP35398 AC112653.1-201ENST00000443851 386 ntBASIC2.71□□□□□ -1.98
RORAP35398 OFD1P3Y-201ENST00000453312 783 ntBASIC2.71□□□□□ -1.98
RORAP35398 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms