Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 HMGN2P3-201ENST00000433603 273 ntBASIC3.14□□□□□ -1.91
RFC4P35249 HMGN2P5-201ENST00000436882 273 ntBASIC3.14□□□□□ -1.91
RFC4P35249 RPL23AP58-201ENST00000440453 469 ntBASIC3.14□□□□□ -1.91
RFC4P35249 AL645638.1-201ENST00000440519 361 ntBASIC3.14□□□□□ -1.91
RFC4P35249 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.14□□□□□ -1.91
RFC4P35249 COX6CP18-201ENST00000448769 222 ntBASIC3.14□□□□□ -1.91
RFC4P35249 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.14□□□□□ -1.91
RFC4P35249 OR4P1P-201ENST00000530808 1136 ntBASIC3.14□□□□□ -1.91
RFC4P35249 MAGOH2P-202ENST00000584384 429 ntBASIC3.14□□□□□ -1.91
RFC4P35249 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.14□□□□□ -1.91
RFC4P35249 AC078899.3-201ENST00000599065 212 ntBASIC3.14□□□□□ -1.91
RFC4P35249 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RFC4P35249 AC080188.3-201ENST00000624842 748 ntBASIC3.14□□□□□ -1.91
RFC4P35249 AC126544.2-201ENST00000625174 749 ntBASIC3.14□□□□□ -1.91
RFC4P35249 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RFC4P35249 AP006437.1-201ENST00000641440 3685 ntBASIC3.14□□□□□ -1.91
RFC4P35249 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RFC4P35249 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.13□□□□□ -1.91
RFC4P35249 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RFC4P35249 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RFC4P35249 RNU6-115P-201ENST00000364310 107 ntBASIC3.13□□□□□ -1.91
RFC4P35249 SNORD82-201ENST00000365530 70 ntBASIC3.13□□□□□ -1.91
RFC4P35249 AL121978.1-201ENST00000402778 359 ntBASIC3.13□□□□□ -1.91
RFC4P35249 AL139098.1-201ENST00000407291 389 ntBASIC3.13□□□□□ -1.91
RFC4P35249 FCF1P2-201ENST00000415284 583 ntBASIC3.13□□□□□ -1.91
RFC4P35249 AC079780.1-201ENST00000428259 207 ntBASIC3.13□□□□□ -1.91
RFC4P35249 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.13□□□□□ -1.91
RFC4P35249 ARF4P4-201ENST00000439608 520 ntBASIC3.13□□□□□ -1.91
RFC4P35249 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RFC4P35249 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.13□□□□□ -1.91
RFC4P35249 RN7SL283P-201ENST00000489055 303 ntBASIC3.13□□□□□ -1.91
RFC4P35249 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.13□□□□□ -1.91
RFC4P35249 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.13□□□□□ -1.91
RFC4P35249 RNA5SP281-201ENST00000516504 135 ntBASIC3.13□□□□□ -1.91
RFC4P35249 AC023632.1-201ENST00000518463 375 ntBASIC3.13□□□□□ -1.91
RFC4P35249 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.13□□□□□ -1.91
RFC4P35249 RANP3-201ENST00000530970 276 ntBASIC3.13□□□□□ -1.91
RFC4P35249 AC021269.2-201ENST00000532318 330 ntBASIC3.13□□□□□ -1.91
RFC4P35249 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.13□□□□□ -1.91
RFC4P35249 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.13□□□□□ -1.91
RFC4P35249 YWHAZP1-201ENST00000556286 722 ntBASIC3.13□□□□□ -1.91
RFC4P35249 VN1R87P-201ENST00000596706 487 ntBASIC3.13□□□□□ -1.91
RFC4P35249 GAS5-AS1-201ENST00000602767 694 ntBASIC3.13□□□□□ -1.91
RFC4P35249 NUTF2P8-201ENST00000604593 363 ntBASIC3.13□□□□□ -1.91
RFC4P35249 AL583856.2-201ENST00000606298 543 ntBASIC3.13□□□□□ -1.91
RFC4P35249 AC046143.2-201ENST00000609789 160 ntBASIC3.13□□□□□ -1.91
RFC4P35249 AC008083.4-201ENST00000615076 444 ntBASIC3.13□□□□□ -1.91
RFC4P35249 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RFC4P35249 AC241585.2-209ENST00000638217 143 ntBASIC3.13□□□□□ -1.91
RFC4P35249 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RFC4P35249 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.12□□□□□ -1.91
RFC4P35249 AC091564.4-201ENST00000533934 2194 ntBASIC3.12□□□□□ -1.91
RFC4P35249 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RFC4P35249 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RFC4P35249 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.12□□□□□ -1.91
RFC4P35249 RNU6-482P-201ENST00000391068 107 ntBASIC3.12□□□□□ -1.91
RFC4P35249 TMSB4XP8-201ENST00000402089 135 ntBASIC3.12□□□□□ -1.91
RFC4P35249 RPL7P27-201ENST00000403775 720 ntBASIC3.12□□□□□ -1.91
RFC4P35249 AC096533.1-201ENST00000411645 353 ntBASIC3.12□□□□□ -1.91
RFC4P35249 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.12□□□□□ -1.91
RFC4P35249 AC080125.1-201ENST00000414888 684 ntBASIC3.12□□□□□ -1.91
RFC4P35249 TMSB4XP6-201ENST00000415187 135 ntBASIC3.12□□□□□ -1.91
RFC4P35249 TMSB4XP1-201ENST00000424567 135 ntBASIC3.12□□□□□ -1.91
RFC4P35249 AC005345.1-201ENST00000431868 217 ntBASIC3.12□□□□□ -1.91
RFC4P35249 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.12□□□□□ -1.91
RFC4P35249 HMGB1P18-201ENST00000438801 619 ntBASIC3.12□□□□□ -1.91
RFC4P35249 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.12□□□□□ -1.91
RFC4P35249 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.12□□□□□ -1.91
RFC4P35249 DYNLL1P6-201ENST00000503440 264 ntBASIC3.12□□□□□ -1.91
RFC4P35249 SUMO2P5-201ENST00000506790 245 ntBASIC3.12□□□□□ -1.91
RFC4P35249 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.12□□□□□ -1.91
RFC4P35249 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.12□□□□□ -1.91
RFC4P35249 AC112206.4-201ENST00000515142 405 ntBASIC3.12□□□□□ -1.91
RFC4P35249 RNU6-56P-201ENST00000516986 93 ntBASIC3.12□□□□□ -1.91
RFC4P35249 RNA5SP135-201ENST00000517019 125 ntBASIC3.12□□□□□ -1.91
RFC4P35249 AC104417.1-201ENST00000523974 751 ntBASIC3.12□□□□□ -1.91
RFC4P35249 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.12□□□□□ -1.91
RFC4P35249 ZNF705CP-201ENST00000530515 889 ntBASIC3.12□□□□□ -1.91
RFC4P35249 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.12□□□□□ -1.91
RFC4P35249 RPL23AP78-201ENST00000599928 470 ntBASIC3.12□□□□□ -1.91
RFC4P35249 AC131902.3-201ENST00000611767 581 ntBASIC3.12□□□□□ -1.91
RFC4P35249 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RFC4P35249 CR381653.2-201ENST00000624041 768 ntBASIC3.12□□□□□ -1.91
RFC4P35249 AP002371.2-201ENST00000624450 503 ntBASIC3.12□□□□□ -1.91
RFC4P35249 AC079228.1-201ENST00000624774 1049 ntBASIC3.12□□□□□ -1.91
RFC4P35249 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.12□□□□□ -1.91
RFC4P35249 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RFC4P35249 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFC4P35249 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFC4P35249 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
RFC4P35249 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.11□□□□□ -1.91
RFC4P35249 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.11□□□□□ -1.91
RFC4P35249 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.11□□□□□ -1.91
RFC4P35249 RPL21P132-201ENST00000331267 462 ntBASIC3.11□□□□□ -1.91
RFC4P35249 RNU1-91P-201ENST00000364746 163 ntBASIC3.11□□□□□ -1.91
RFC4P35249 AL133264.1-201ENST00000407157 562 ntBASIC3.11□□□□□ -1.91
RFC4P35249 RN7SKP123-201ENST00000410732 291 ntBASIC3.11□□□□□ -1.91
RFC4P35249 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.11□□□□□ -1.91
RFC4P35249 MRPL42P4-201ENST00000453267 443 ntBASIC3.11□□□□□ -1.91
RFC4P35249 RPL21P99-201ENST00000480369 423 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms