Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC241584.1-201ENST00000438469 1241 ntBASIC2.36□□□□□ -2.03
RPA3P35244 MTCO1P48-201ENST00000448024 1096 ntBASIC2.36□□□□□ -2.03
RPA3P35244 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.36□□□□□ -2.03
RPA3P35244 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.36□□□□□ -2.03
RPA3P35244 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.36□□□□□ -2.03
RPA3P35244 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.36□□□□□ -2.03
RPA3P35244 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RPA3P35244 MTCO1P47-201ENST00000523889 1271 ntBASIC2.36□□□□□ -2.03
RPA3P35244 AP001646.1-201ENST00000527936 915 ntBASIC2.36□□□□□ -2.03
RPA3P35244 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
RPA3P35244 AP000889.2-201ENST00000532684 490 ntBASIC2.36□□□□□ -2.03
RPA3P35244 LINC00557-201ENST00000563184 1279 ntBASIC2.36□□□□□ -2.03
RPA3P35244 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.36□□□□□ -2.03
RPA3P35244 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.36□□□□□ -2.03
RPA3P35244 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.36□□□□□ -2.03
RPA3P35244 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.36□□□□□ -2.03
RPA3P35244 AC079089.3-201ENST00000603094 673 ntBASIC2.36□□□□□ -2.03
RPA3P35244 AL161629.2-201ENST00000615347 275 ntBASIC2.36□□□□□ -2.03
RPA3P35244 SNHG22-203ENST00000617833 660 ntBASIC2.36□□□□□ -2.03
RPA3P35244 MIR6852-201ENST00000621699 66 ntBASIC2.36□□□□□ -2.03
RPA3P35244 AC079597.1-201ENST00000624306 508 ntBASIC2.36□□□□□ -2.03
RPA3P35244 AL512506.2-201ENST00000624472 458 ntBASIC2.36□□□□□ -2.03
RPA3P35244 AL160394.1-201ENST00000624765 724 ntBASIC2.36□□□□□ -2.03
RPA3P35244 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.36□□□□□ -2.03
RPA3P35244 FO624990.1-201ENST00000636373 85 ntBASIC2.36□□□□□ -2.03
RPA3P35244 AC087359.1-201ENST00000508335 1740 ntBASIC2.36□□□□□ -2.03
RPA3P35244 AC012321.1-201ENST00000561622 1588 ntBASIC2.36□□□□□ -2.03
RPA3P35244 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RPA3P35244 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.35□□□□□ -2.03
RPA3P35244 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
RPA3P35244 RNU6-839P-201ENST00000363347 108 ntBASIC2.35□□□□□ -2.03
RPA3P35244 RNU1-109P-201ENST00000383960 147 ntBASIC2.35□□□□□ -2.03
RPA3P35244 MIR135A2-201ENST00000384854 100 ntBASIC2.35□□□□□ -2.03
RPA3P35244 UBE2V1P2-201ENST00000397758 440 ntBASIC2.35□□□□□ -2.03
RPA3P35244 AL133264.1-201ENST00000407157 562 ntBASIC2.35□□□□□ -2.03
RPA3P35244 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.35□□□□□ -2.03
RPA3P35244 BX682237.1-201ENST00000415016 335 ntBASIC2.35□□□□□ -2.03
RPA3P35244 BOLA3P4-201ENST00000418151 400 ntBASIC2.35□□□□□ -2.03
RPA3P35244 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.35□□□□□ -2.03
RPA3P35244 RAC1P8-201ENST00000427086 527 ntBASIC2.35□□□□□ -2.03
RPA3P35244 PSMA6P3-201ENST00000428242 164 ntBASIC2.35□□□□□ -2.03
RPA3P35244 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.35□□□□□ -2.03
RPA3P35244 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.35□□□□□ -2.03
RPA3P35244 AC009296.1-201ENST00000443146 155 ntBASIC2.35□□□□□ -2.03
RPA3P35244 snoU13.28-201ENST00000459235 104 ntBASIC2.35□□□□□ -2.03
RPA3P35244 AL049714.1-201ENST00000466686 347 ntBASIC2.35□□□□□ -2.03
RPA3P35244 AC104164.3-201ENST00000467363 1258 ntBASIC2.35□□□□□ -2.03
RPA3P35244 OR52A4P-202ENST00000481634 799 ntBASIC2.35□□□□□ -2.03
RPA3P35244 AC147055.4-201ENST00000504399 745 ntBASIC2.35□□□□□ -2.03
RPA3P35244 TTC39CP1-201ENST00000512513 755 ntBASIC2.35□□□□□ -2.03
RPA3P35244 AC119751.5-201ENST00000514077 770 ntBASIC2.35□□□□□ -2.03
RPA3P35244 RNU6-798P-201ENST00000516912 103 ntBASIC2.35□□□□□ -2.03
RPA3P35244 AC026616.1-201ENST00000523157 525 ntBASIC2.35□□□□□ -2.03
RPA3P35244 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.35□□□□□ -2.03
RPA3P35244 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RPA3P35244 AC090502.2-201ENST00000549267 280 ntBASIC2.35□□□□□ -2.03
RPA3P35244 AC090888.1-201ENST00000561335 1141 ntBASIC2.35□□□□□ -2.03
RPA3P35244 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.35□□□□□ -2.03
RPA3P35244 AC009097.3-201ENST00000563557 1018 ntBASIC2.35□□□□□ -2.03
RPA3P35244 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.35□□□□□ -2.03
RPA3P35244 MIR4789-201ENST00000577469 82 ntBASIC2.35□□□□□ -2.03
RPA3P35244 AL161734.1-201ENST00000609720 557 ntBASIC2.35□□□□□ -2.03
RPA3P35244 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.35□□□□□ -2.03
RPA3P35244 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.35□□□□□ -2.03
RPA3P35244 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RPA3P35244 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RPA3P35244 AC026241.1-201ENST00000517873 2142 ntBASIC2.35□□□□□ -2.03
RPA3P35244 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
RPA3P35244 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RPA3P35244 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RPA3P35244 MAPK10-266ENST00000641066 6555 ntBASIC2.34□□□□□ -2.03
RPA3P35244 AC008568.2-201ENST00000623862 2313 ntBASIC2.34□□□□□ -2.03
RPA3P35244 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
RPA3P35244 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
RPA3P35244 SNORD114-30-201ENST00000364448 72 ntBASIC2.34□□□□□ -2.03
RPA3P35244 U3.12-201ENST00000364498 214 ntBASIC2.34□□□□□ -2.03
RPA3P35244 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.34□□□□□ -2.03
RPA3P35244 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
RPA3P35244 RNU6-198P-201ENST00000384258 104 ntBASIC2.34□□□□□ -2.03
RPA3P35244 RNU6-932P-201ENST00000391108 106 ntBASIC2.34□□□□□ -2.03
RPA3P35244 NPM1P10-201ENST00000398310 865 ntBASIC2.34□□□□□ -2.03
RPA3P35244 TMSB4XP8-201ENST00000402089 135 ntBASIC2.34□□□□□ -2.03
RPA3P35244 TMSB4XP6-201ENST00000415187 135 ntBASIC2.34□□□□□ -2.03
RPA3P35244 AC092634.6-201ENST00000418558 192 ntBASIC2.34□□□□□ -2.03
RPA3P35244 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.34□□□□□ -2.03
RPA3P35244 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.34□□□□□ -2.03
RPA3P35244 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.34□□□□□ -2.03
RPA3P35244 RPL27AP8-201ENST00000424277 446 ntBASIC2.34□□□□□ -2.03
RPA3P35244 TMSB4XP1-201ENST00000424567 135 ntBASIC2.34□□□□□ -2.03
RPA3P35244 AC104435.1-201ENST00000483483 166 ntBASIC2.34□□□□□ -2.03
RPA3P35244 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.34□□□□□ -2.03
RPA3P35244 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.34□□□□□ -2.03
RPA3P35244 AC109464.2-201ENST00000510242 943 ntBASIC2.34□□□□□ -2.03
RPA3P35244 AC010625.1-201ENST00000511296 403 ntBASIC2.34□□□□□ -2.03
RPA3P35244 RNA5SP24-201ENST00000516478 95 ntBASIC2.34□□□□□ -2.03
RPA3P35244 AC021269.2-201ENST00000532318 330 ntBASIC2.34□□□□□ -2.03
RPA3P35244 AC068339.2-201ENST00000534395 618 ntBASIC2.34□□□□□ -2.03
RPA3P35244 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.34□□□□□ -2.03
RPA3P35244 SETP7-201ENST00000552169 453 ntBASIC2.34□□□□□ -2.03
RPA3P35244 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms