Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.75□□□□□ -1.97
SHMT2P34897 AC021146.8-201ENST00000507455 733 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 HIGD1AP13-201ENST00000509878 289 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 XKRY-201ENST00000510392 1100 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.75□□□□□ -1.97
SHMT2P34897 AC093677.1-201ENST00000514414 678 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.75□□□□□ -1.97
SHMT2P34897 AC022861.1-201ENST00000522981 663 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.75□□□□□ -1.97
SHMT2P34897 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.75□□□□□ -1.97
SHMT2P34897 CR383656.7-201ENST00000548164 174 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.75□□□□□ -1.97
SHMT2P34897 MED28P6-201ENST00000558776 231 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.75□□□□□ -1.97
SHMT2P34897 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.75□□□□□ -1.97
SHMT2P34897 OR4K7P-201ENST00000580232 945 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.75□□□□□ -1.97
SHMT2P34897 AC011471.1-201ENST00000585766 187 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 DUXAP4-201ENST00000603046 613 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 AC004853.1-201ENST00000604902 698 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 AC106052.1-201ENST00000608029 497 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 AC024933.1-201ENST00000608472 348 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.75□□□□□ -1.97
SHMT2P34897 AL161431.1-201ENST00000618966 4205 ntBASIC2.75□□□□□ -1.97
SHMT2P34897 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.74□□□□□ -1.97
SHMT2P34897 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.74□□□□□ -1.97
SHMT2P34897 ZNF29P-201ENST00000225587 168 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 RNU4-68P-201ENST00000364314 141 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 RNU6-343P-201ENST00000364709 104 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 RNU6-882P-201ENST00000391025 103 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 RNU6-1242P-201ENST00000391052 103 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 AL356131.1-201ENST00000405826 414 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 MTCO2P8-201ENST00000412213 658 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 TPMTP2-201ENST00000414372 726 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.74□□□□□ -1.97
SHMT2P34897 AC013410.2-201ENST00000422627 201 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.74□□□□□ -1.97
SHMT2P34897 AC087499.2-201ENST00000432861 149 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 AC004866.2-201ENST00000438285 481 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.74□□□□□ -1.97
SHMT2P34897 AL831737.1-201ENST00000441288 271 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.74□□□□□ -1.97
SHMT2P34897 RPL23AP20-201ENST00000447965 421 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
SHMT2P34897 RPL21P134-201ENST00000453468 483 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.74□□□□□ -1.97
SHMT2P34897 RNU7-136P-201ENST00000458819 69 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.74□□□□□ -1.97
SHMT2P34897 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.74□□□□□ -1.97
SHMT2P34897 AC079395.1-201ENST00000510981 262 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SHMT2P34897 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
SHMT2P34897 HPRT1P3-201ENST00000539521 576 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 AL391156.1-201ENST00000554965 554 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 COX6CP3-201ENST00000580869 223 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.74□□□□□ -1.97
SHMT2P34897 ELOCP29-201ENST00000588193 334 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 VN1R92P-201ENST00000598511 928 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 AL022099.1-201ENST00000604551 712 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 AC012443.1-201ENST00000605605 231 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 AL390208.1-201ENST00000605885 644 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 AC131235.4-201ENST00000609288 620 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 AC090115.4-201ENST00000609970 188 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 AC131902.3-201ENST00000611767 581 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 MIR7106-201ENST00000612419 65 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.74□□□□□ -1.97
SHMT2P34897 AL596245.1-201ENST00000618994 362 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 AC091046.2-201ENST00000620775 665 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 MAPK10-322ENST00000641485 4530 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.74□□□□□ -1.97
SHMT2P34897 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SHMT2P34897 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
SHMT2P34897 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.73□□□□□ -1.97
SHMT2P34897 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SHMT2P34897 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.73□□□□□ -1.97
SHMT2P34897 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SHMT2P34897 MIR23A-201ENST00000385245 73 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 U3.26-201ENST00000391236 204 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 RPL17P50-201ENST00000396131 546 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.73□□□□□ -1.97
SHMT2P34897 AC109780.2-201ENST00000413467 845 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 AC106883.1-201ENST00000418805 562 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 TIMM9P2-201ENST00000419324 266 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 RPL21P32-201ENST00000419877 477 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.73□□□□□ -1.97
SHMT2P34897 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.73□□□□□ -1.97
SHMT2P34897 MTND4P6-201ENST00000438297 472 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.73□□□□□ -1.97
SHMT2P34897 ARPC3P5-201ENST00000448802 534 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 AL590639.1-201ENST00000456484 337 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 AC097493.1-201ENST00000463958 372 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.73□□□□□ -1.97
SHMT2P34897 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.73□□□□□ -1.97
SHMT2P34897 CBX3P3-201ENST00000508108 532 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.73□□□□□ -1.97
SHMT2P34897 SCARNA1-201ENST00000517138 166 ntBASIC2.73□□□□□ -1.97
SHMT2P34897 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.73□□□□□ -1.97
SHMT2P34897 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SHMT2P34897 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms