Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 PLGLA-201ENST00000465668 449 ntBASIC4□□□□□ -1.77
CIITAP33076 AL358832.1-201ENST00000497800 389 ntBASIC4□□□□□ -1.77
CIITAP33076 AC105252.1-201ENST00000503089 286 ntBASIC4□□□□□ -1.77
CIITAP33076 AC093767.1-201ENST00000504523 156 ntBASIC4□□□□□ -1.77
CIITAP33076 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4□□□□□ -1.77
CIITAP33076 MTCO3P44-201ENST00000510977 541 ntBASIC4□□□□□ -1.77
CIITAP33076 AC011352.1-201ENST00000512300 793 ntBASIC4□□□□□ -1.77
CIITAP33076 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4□□□□□ -1.77
CIITAP33076 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4□□□□□ -1.77
CIITAP33076 AP004371.1-201ENST00000525240 214 ntBASIC4□□□□□ -1.77
CIITAP33076 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4□□□□□ -1.77
CIITAP33076 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4□□□□□ -1.77
CIITAP33076 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4□□□□□ -1.77
CIITAP33076 AC053481.3-201ENST00000577881 843 ntBASIC4□□□□□ -1.77
CIITAP33076 MIR4801-201ENST00000582704 82 ntBASIC4□□□□□ -1.77
CIITAP33076 AC007687.1-201ENST00000602704 304 ntBASIC4□□□□□ -1.77
CIITAP33076 RPL23AP92-201ENST00000603609 255 ntBASIC4□□□□□ -1.77
CIITAP33076 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4□□□□□ -1.77
CIITAP33076 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4□□□□□ -1.77
CIITAP33076 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4□□□□□ -1.77
CIITAP33076 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CIITAP33076 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
CIITAP33076 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4□□□□□ -1.77
CIITAP33076 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CIITAP33076 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CIITAP33076 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
CIITAP33076 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CIITAP33076 AL049780.3-201ENST00000624612 1583 ntBASIC3.99□□□□□ -1.77
CIITAP33076 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.99□□□□□ -1.77
CIITAP33076 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CIITAP33076 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CIITAP33076 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CIITAP33076 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CIITAP33076 RNU6-744P-201ENST00000365557 107 ntBASIC3.99□□□□□ -1.77
CIITAP33076 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
CIITAP33076 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CIITAP33076 RNU6-1316P-201ENST00000384242 108 ntBASIC3.99□□□□□ -1.77
CIITAP33076 MIR670-201ENST00000390142 98 ntBASIC3.99□□□□□ -1.77
CIITAP33076 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.99□□□□□ -1.77
CIITAP33076 RPS20P2-201ENST00000402520 389 ntBASIC3.99□□□□□ -1.77
CIITAP33076 AL138878.1-201ENST00000405131 347 ntBASIC3.99□□□□□ -1.77
CIITAP33076 MIR548F1-201ENST00000408667 84 ntBASIC3.99□□□□□ -1.77
CIITAP33076 MTCO1P17-201ENST00000411522 491 ntBASIC3.99□□□□□ -1.77
CIITAP33076 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.99□□□□□ -1.77
CIITAP33076 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.99□□□□□ -1.77
CIITAP33076 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.99□□□□□ -1.77
CIITAP33076 AL590233.1-201ENST00000430017 456 ntBASIC3.99□□□□□ -1.77
CIITAP33076 AC073063.1-201ENST00000434352 607 ntBASIC3.99□□□□□ -1.77
CIITAP33076 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.99□□□□□ -1.77
CIITAP33076 CYCSP43-201ENST00000438233 310 ntBASIC3.99□□□□□ -1.77
CIITAP33076 AL138799.3-201ENST00000438968 350 ntBASIC3.99□□□□□ -1.77
CIITAP33076 HSPE1P28-201ENST00000443139 211 ntBASIC3.99□□□□□ -1.77
CIITAP33076 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.99□□□□□ -1.77
CIITAP33076 GAPDHP17-201ENST00000449858 1001 ntBASIC3.99□□□□□ -1.77
CIITAP33076 NDUFB4P2-201ENST00000509515 391 ntBASIC3.99□□□□□ -1.77
CIITAP33076 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.99□□□□□ -1.77
CIITAP33076 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.99□□□□□ -1.77
CIITAP33076 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
CIITAP33076 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.99□□□□□ -1.77
CIITAP33076 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.99□□□□□ -1.77
CIITAP33076 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.99□□□□□ -1.77
CIITAP33076 AL121576.1-201ENST00000556055 276 ntBASIC3.99□□□□□ -1.77
CIITAP33076 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.99□□□□□ -1.77
CIITAP33076 AC087481.2-201ENST00000565492 330 ntBASIC3.99□□□□□ -1.77
CIITAP33076 AL353997.4-201ENST00000586196 166 ntBASIC3.99□□□□□ -1.77
CIITAP33076 BBIP1P1-201ENST00000602999 279 ntBASIC3.99□□□□□ -1.77
CIITAP33076 AL161729.4-201ENST00000604650 476 ntBASIC3.99□□□□□ -1.77
CIITAP33076 U3.45-201ENST00000607547 219 ntBASIC3.99□□□□□ -1.77
CIITAP33076 AC091965.4-201ENST00000607691 587 ntBASIC3.99□□□□□ -1.77
CIITAP33076 AF250324.2-201ENST00000608299 610 ntBASIC3.99□□□□□ -1.77
CIITAP33076 AC006023.2-201ENST00000609916 167 ntBASIC3.99□□□□□ -1.77
CIITAP33076 AP001506.1-201ENST00000615444 211 ntBASIC3.99□□□□□ -1.77
CIITAP33076 U4.6-201ENST00000621618 127 ntBASIC3.99□□□□□ -1.77
CIITAP33076 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.99□□□□□ -1.77
CIITAP33076 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.99□□□□□ -1.77
CIITAP33076 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CIITAP33076 HSPA8P1-201ENST00000425843 1833 ntBASIC3.99□□□□□ -1.77
CIITAP33076 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.99□□□□□ -1.77
CIITAP33076 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CIITAP33076 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CIITAP33076 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CIITAP33076 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.99□□□□□ -1.77
CIITAP33076 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CIITAP33076 AC066616.2-201ENST00000559334 1481 ntBASIC3.98□□□□□ -1.77
CIITAP33076 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CIITAP33076 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
CIITAP33076 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CIITAP33076 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CIITAP33076 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CIITAP33076 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CIITAP33076 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CIITAP33076 FRG1CP-201ENST00000358464 769 ntBASIC3.98□□□□□ -1.77
CIITAP33076 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.98□□□□□ -1.77
CIITAP33076 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CIITAP33076 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.98□□□□□ -1.77
CIITAP33076 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.98□□□□□ -1.77
CIITAP33076 MTND1P21-201ENST00000412991 285 ntBASIC3.98□□□□□ -1.77
CIITAP33076 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.98□□□□□ -1.77
CIITAP33076 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.98□□□□□ -1.77
CIITAP33076 MTCO3P12-201ENST00000416718 547 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms