Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC023043.2-201ENST00000589678 1026 ntBASIC4.56□□□□□ -1.68
HOXC12P31275 AC011487.3-201ENST00000593607 453 ntBASIC4.56□□□□□ -1.68
HOXC12P31275 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXC12P31275 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXC12P31275 AL080274.1-201ENST00000605565 220 ntBASIC4.56□□□□□ -1.68
HOXC12P31275 AC124303.1-201ENST00000605703 360 ntBASIC4.56□□□□□ -1.68
HOXC12P31275 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXC12P31275 EIF3FP1-201ENST00000613970 806 ntBASIC4.56□□□□□ -1.68
HOXC12P31275 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC12P31275 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.56□□□□□ -1.68
HOXC12P31275 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXC12P31275 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXC12P31275 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC12P31275 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC12P31275 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXC12P31275 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXC12P31275 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC12P31275 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXC12P31275 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC12P31275 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.55□□□□□ -1.68
HOXC12P31275 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
HOXC12P31275 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC12P31275 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC12P31275 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC12P31275 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.55□□□□□ -1.68
HOXC12P31275 AL391684.1-202ENST00000641293 1636 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HOXC12P31275 HSPA8P4-201ENST00000511877 1920 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC12P31275 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HOXC12P31275 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC12P31275 Y_RNA.146-201ENST00000363549 102 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 RNU1-32P-201ENST00000363937 159 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 Y_RNA.212-201ENST00000364177 102 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 Y_RNA.216-201ENST00000364205 93 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 Y_RNA.399-201ENST00000383955 105 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 MIR606-201ENST00000384851 96 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 RNA5SP241-201ENST00000391326 114 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 AL078599.1-201ENST00000402075 293 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 RPL5P18-201ENST00000406671 891 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 HSPE1P8-201ENST00000406997 288 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 RPL7P10-201ENST00000417407 739 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 DDX39BP1-205ENST00000422507 192 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.55□□□□□ -1.68
HOXC12P31275 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXC12P31275 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC12P31275 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXC12P31275 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC12P31275 RNU7-167P-201ENST00000459160 62 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 RNU2-69P-201ENST00000516061 100 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HOXC12P31275 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXC12P31275 AC090115.3-201ENST00000553218 849 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 AL163153.1-201ENST00000554223 283 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXC12P31275 AC005951.2-201ENST00000576282 495 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 MTCYBP13-201ENST00000578634 1093 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 PRPF19P1-201ENST00000584766 898 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 RNA5SP108-201ENST00000605921 117 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 AC015967.1-201ENST00000619893 476 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 AL353748.2-201ENST00000622148 471 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 AP000346.3-201ENST00000622821 210 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 MTND5P42-201ENST00000637720 498 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 AC008013.2-202ENST00000637965 364 ntBASIC4.55□□□□□ -1.68
HOXC12P31275 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HOXC12P31275 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC12P31275 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC12P31275 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC12P31275 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC12P31275 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
HOXC12P31275 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC12P31275 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HOXC12P31275 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC12P31275 PRO1804-201ENST00000623780 2050 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 U3.3-201ENST00000362986 216 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 Y_RNA.202-201ENST00000364083 110 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC12P31275 Y_RNA.445-201ENST00000384168 102 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC12P31275 RPS4XP7-201ENST00000406274 780 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC12P31275 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC12P31275 HMGB1P27-201ENST00000431429 603 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 AL591704.1-201ENST00000432574 275 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXC12P31275 AL591212.2-201ENST00000433923 257 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC12P31275 H2AFZP5-201ENST00000446960 382 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 AC133473.1-201ENST00000455173 299 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 RN7SL385P-201ENST00000468873 276 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXC12P31275 AC022795.1-201ENST00000473808 480 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC12P31275 SNORA14.1-201ENST00000516113 141 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 RNA5SP373-201ENST00000517271 95 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.54□□□□□ -1.68
HOXC12P31275 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXC12P31275 ERHP1-201ENST00000523006 310 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms