Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL109809.4-201ENST00000603520 2185 ntBASIC2.38□□□□□ -2.03
CLIP1P30622 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CLIP1P30622 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CLIP1P30622 RNU6-1180P-201ENST00000364935 107 ntBASIC2.38□□□□□ -2.03
CLIP1P30622 MIR320A-201ENST00000385302 82 ntBASIC2.38□□□□□ -2.03
CLIP1P30622 Z85995.1-201ENST00000415547 335 ntBASIC2.38□□□□□ -2.03
CLIP1P30622 AL513185.2-201ENST00000425543 193 ntBASIC2.38□□□□□ -2.03
CLIP1P30622 LSM1P1-201ENST00000438629 273 ntBASIC2.38□□□□□ -2.03
CLIP1P30622 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.38□□□□□ -2.03
CLIP1P30622 RPS15AP36-201ENST00000492022 382 ntBASIC2.38□□□□□ -2.03
CLIP1P30622 RNU6-711P-201ENST00000517255 106 ntBASIC2.38□□□□□ -2.03
CLIP1P30622 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.38□□□□□ -2.03
CLIP1P30622 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.37□□□□□ -2.03
CLIP1P30622 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.37□□□□□ -2.03
CLIP1P30622 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.37□□□□□ -2.03
CLIP1P30622 RPL17P49-201ENST00000443728 411 ntBASIC2.37□□□□□ -2.03
CLIP1P30622 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.37□□□□□ -2.03
CLIP1P30622 Z73417.1-201ENST00000447373 778 ntBASIC2.37□□□□□ -2.03
CLIP1P30622 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.37□□□□□ -2.03
CLIP1P30622 RPPH1-2P-201ENST00000516688 293 ntBASIC2.37□□□□□ -2.03
CLIP1P30622 ARL2BPP2-201ENST00000550907 489 ntBASIC2.37□□□□□ -2.03
CLIP1P30622 AC125611.2-201ENST00000551907 647 ntBASIC2.37□□□□□ -2.03
CLIP1P30622 AC012493.3-201ENST00000604494 112 ntBASIC2.37□□□□□ -2.03
CLIP1P30622 AP000676.4-201ENST00000624659 623 ntBASIC2.37□□□□□ -2.03
CLIP1P30622 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLIP1P30622 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLIP1P30622 SNORA7.1-201ENST00000363750 139 ntBASIC2.36□□□□□ -2.03
CLIP1P30622 RNA5SP363-201ENST00000365072 115 ntBASIC2.36□□□□□ -2.03
CLIP1P30622 RNU2-40P-201ENST00000410833 196 ntBASIC2.36□□□□□ -2.03
CLIP1P30622 VN1R31P-201ENST00000417498 730 ntBASIC2.36□□□□□ -2.03
CLIP1P30622 AL354695.1-201ENST00000427935 228 ntBASIC2.36□□□□□ -2.03
CLIP1P30622 PSMA2P3-201ENST00000429685 675 ntBASIC2.36□□□□□ -2.03
CLIP1P30622 AL137159.1-201ENST00000452808 512 ntBASIC2.36□□□□□ -2.03
CLIP1P30622 TOMM22P6-201ENST00000465035 409 ntBASIC2.36□□□□□ -2.03
CLIP1P30622 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.36□□□□□ -2.03
CLIP1P30622 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.36□□□□□ -2.03
CLIP1P30622 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.36□□□□□ -2.03
CLIP1P30622 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CLIP1P30622 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.35□□□□□ -2.03
CLIP1P30622 AC234782.4-201ENST00000417646 1048 ntBASIC2.35□□□□□ -2.03
CLIP1P30622 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.35□□□□□ -2.03
CLIP1P30622 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CLIP1P30622 Y_RNA.224-201ENST00000364308 111 ntBASIC2.34□□□□□ -2.03
CLIP1P30622 SNORA67.1-201ENST00000364749 141 ntBASIC2.34□□□□□ -2.03
CLIP1P30622 AL356057.2-201ENST00000403318 432 ntBASIC2.34□□□□□ -2.03
CLIP1P30622 MIR1276-201ENST00000408707 83 ntBASIC2.34□□□□□ -2.03
CLIP1P30622 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.34□□□□□ -2.03
CLIP1P30622 AL445669.1-201ENST00000426743 755 ntBASIC2.34□□□□□ -2.03
CLIP1P30622 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.34□□□□□ -2.03
CLIP1P30622 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.34□□□□□ -2.03
CLIP1P30622 AC093281.2-201ENST00000510153 597 ntBASIC2.34□□□□□ -2.03
CLIP1P30622 MTCO3P44-201ENST00000510977 541 ntBASIC2.34□□□□□ -2.03
CLIP1P30622 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.34□□□□□ -2.03
CLIP1P30622 RNU1-92P-201ENST00000517017 135 ntBASIC2.34□□□□□ -2.03
CLIP1P30622 RNA5SP490-201ENST00000517141 136 ntBASIC2.34□□□□□ -2.03
CLIP1P30622 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.34□□□□□ -2.03
CLIP1P30622 AC098848.2-201ENST00000588023 330 ntBASIC2.34□□□□□ -2.03
CLIP1P30622 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CLIP1P30622 AC112503.2-201ENST00000609005 552 ntBASIC2.34□□□□□ -2.03
CLIP1P30622 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.34□□□□□ -2.03
CLIP1P30622 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
CLIP1P30622 ZNF209P-201ENST00000593450 2304 ntBASIC2.34□□□□□ -2.03
CLIP1P30622 AC027514.1-201ENST00000588561 1603 ntBASIC2.34□□□□□ -2.04
CLIP1P30622 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.34□□□□□ -2.04
CLIP1P30622 AC109780.2-201ENST00000413467 845 ntBASIC2.34□□□□□ -2.04
CLIP1P30622 PRELID3BP11-201ENST00000414230 479 ntBASIC2.34□□□□□ -2.04
CLIP1P30622 AC009237.2-201ENST00000421358 284 ntBASIC2.34□□□□□ -2.04
CLIP1P30622 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.34□□□□□ -2.04
CLIP1P30622 DNAJC19P4-201ENST00000440115 345 ntBASIC2.34□□□□□ -2.04
CLIP1P30622 OR10R1P-201ENST00000441524 1141 ntBASIC2.34□□□□□ -2.04
CLIP1P30622 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.34□□□□□ -2.04
CLIP1P30622 SNORD121B-201ENST00000458838 81 ntBASIC2.34□□□□□ -2.04
CLIP1P30622 AC010683.1-201ENST00000473673 378 ntBASIC2.34□□□□□ -2.04
CLIP1P30622 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.34□□□□□ -2.04
CLIP1P30622 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.34□□□□□ -2.04
CLIP1P30622 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.34□□□□□ -2.04
CLIP1P30622 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.34□□□□□ -2.04
CLIP1P30622 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.34□□□□□ -2.04
CLIP1P30622 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.34□□□□□ -2.04
CLIP1P30622 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.34□□□□□ -2.04
CLIP1P30622 NUP58P1-201ENST00000502546 1738 ntBASIC2.33□□□□□ -2.04
CLIP1P30622 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.33□□□□□ -2.04
CLIP1P30622 MORF4L1P7-201ENST00000426038 703 ntBASIC2.33□□□□□ -2.04
CLIP1P30622 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.33□□□□□ -2.04
CLIP1P30622 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.33□□□□□ -2.04
CLIP1P30622 RPL21P104-201ENST00000464143 478 ntBASIC2.33□□□□□ -2.04
CLIP1P30622 AP005435.4-201ENST00000529514 284 ntBASIC2.33□□□□□ -2.04
CLIP1P30622 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.33□□□□□ -2.04
CLIP1P30622 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CLIP1P30622 AC121761.2-201ENST00000617300 689 ntBASIC2.33□□□□□ -2.04
CLIP1P30622 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.33□□□□□ -2.04
CLIP1P30622 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLIP1P30622 RNU1-52P-201ENST00000384190 164 ntBASIC2.32□□□□□ -2.04
CLIP1P30622 AL030996.1-201ENST00000411430 235 ntBASIC2.32□□□□□ -2.04
CLIP1P30622 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.32□□□□□ -2.04
CLIP1P30622 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.32□□□□□ -2.04
CLIP1P30622 RPL30P3-201ENST00000424262 333 ntBASIC2.32□□□□□ -2.04
CLIP1P30622 HMGN2P16-201ENST00000456802 261 ntBASIC2.32□□□□□ -2.04
CLIP1P30622 AC068781.1-201ENST00000488231 618 ntBASIC2.32□□□□□ -2.04
CLIP1P30622 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms