Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 USP9YP10-201ENST00000454868 628 ntBASIC2.06□□□□□ -2.08
COL4A5P29400 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.06□□□□□ -2.08
COL4A5P29400 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.06□□□□□ -2.08
COL4A5P29400 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.06□□□□□ -2.08
COL4A5P29400 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.06□□□□□ -2.08
COL4A5P29400 MTND4P23-201ENST00000447723 1363 ntBASIC2.05□□□□□ -2.08
COL4A5P29400 AC005336.3-201ENST00000623833 2679 ntBASIC2.05□□□□□ -2.08
COL4A5P29400 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
COL4A5P29400 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.05□□□□□ -2.08
COL4A5P29400 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.05□□□□□ -2.08
COL4A5P29400 UBE2L2-201ENST00000254302 429 ntBASIC2.05□□□□□ -2.08
COL4A5P29400 RNA5SP391-201ENST00000363456 119 ntBASIC2.05□□□□□ -2.08
COL4A5P29400 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.05□□□□□ -2.08
COL4A5P29400 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.05□□□□□ -2.08
COL4A5P29400 AC023128.2-201ENST00000420880 1223 ntBASIC2.05□□□□□ -2.08
COL4A5P29400 TRIAP1P1-201ENST00000427062 225 ntBASIC2.05□□□□□ -2.08
COL4A5P29400 TPTE2P6-202ENST00000445572 1007 ntBASIC2.05□□□□□ -2.08
COL4A5P29400 AL035407.2-201ENST00000454090 378 ntBASIC2.05□□□□□ -2.08
COL4A5P29400 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.05□□□□□ -2.08
COL4A5P29400 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.05□□□□□ -2.08
COL4A5P29400 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.05□□□□□ -2.08
COL4A5P29400 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.05□□□□□ -2.08
COL4A5P29400 PVT1_3.1-201ENST00000620853 95 ntBASIC2.05□□□□□ -2.08
COL4A5P29400 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.05□□□□□ -2.08
COL4A5P29400 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.05□□□□□ -2.08
COL4A5P29400 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.05□□□□□ -2.08
COL4A5P29400 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.04□□□□□ -2.08
COL4A5P29400 OR51AB1P-201ENST00000429046 620 ntBASIC2.04□□□□□ -2.08
COL4A5P29400 MTCO1P57-201ENST00000432182 261 ntBASIC2.04□□□□□ -2.08
COL4A5P29400 HMGB1P12-201ENST00000438594 598 ntBASIC2.04□□□□□ -2.08
COL4A5P29400 SNRPFP4-201ENST00000456366 242 ntBASIC2.04□□□□□ -2.08
COL4A5P29400 AC090071.1-201ENST00000507713 644 ntBASIC2.04□□□□□ -2.08
COL4A5P29400 RNU1-61P-201ENST00000516107 151 ntBASIC2.04□□□□□ -2.08
COL4A5P29400 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
COL4A5P29400 AC074029.2-201ENST00000551045 634 ntBASIC2.04□□□□□ -2.08
COL4A5P29400 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.04□□□□□ -2.08
COL4A5P29400 AC023158.1-201ENST00000561632 1025 ntBASIC2.04□□□□□ -2.08
COL4A5P29400 MIR3690-201ENST00000580266 75 ntBASIC2.04□□□□□ -2.08
COL4A5P29400 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.04□□□□□ -2.08
COL4A5P29400 SUMO2P14-201ENST00000604488 293 ntBASIC2.04□□□□□ -2.08
COL4A5P29400 MIR502-201ENST00000606349 86 ntBASIC2.04□□□□□ -2.08
COL4A5P29400 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
COL4A5P29400 MTCO1P6-201ENST00000481192 1384 ntBASIC2.04□□□□□ -2.08
COL4A5P29400 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
COL4A5P29400 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.04□□□□□ -2.08
COL4A5P29400 CKAP2P1-201ENST00000555477 2049 ntBASIC2.04□□□□□ -2.08
COL4A5P29400 AC233981.2-201ENST00000611524 1614 ntBASIC2.04□□□□□ -2.08
COL4A5P29400 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
COL4A5P29400 AL355578.1-201ENST00000607405 1328 ntBASIC2.04□□□□□ -2.08
COL4A5P29400 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
COL4A5P29400 RNY1-201ENST00000364228 113 ntBASIC2.03□□□□□ -2.08
COL4A5P29400 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.03□□□□□ -2.08
COL4A5P29400 HMGN2P35-201ENST00000412164 270 ntBASIC2.03□□□□□ -2.08
COL4A5P29400 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.03□□□□□ -2.08
COL4A5P29400 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.03□□□□□ -2.08
COL4A5P29400 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.03□□□□□ -2.08
COL4A5P29400 AL358075.3-201ENST00000426289 226 ntBASIC2.03□□□□□ -2.08
COL4A5P29400 MTCO1P43-201ENST00000431831 488 ntBASIC2.03□□□□□ -2.08
COL4A5P29400 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.03□□□□□ -2.08
COL4A5P29400 Z77249.1-201ENST00000444622 1175 ntBASIC2.03□□□□□ -2.08
COL4A5P29400 ATP5J2P3-201ENST00000451550 258 ntBASIC2.03□□□□□ -2.08
COL4A5P29400 AC096992.1-201ENST00000459808 709 ntBASIC2.03□□□□□ -2.08
COL4A5P29400 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.03□□□□□ -2.08
COL4A5P29400 AC008562.1-201ENST00000521763 330 ntBASIC2.03□□□□□ -2.08
COL4A5P29400 AC135279.1-201ENST00000543493 504 ntBASIC2.03□□□□□ -2.08
COL4A5P29400 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.03□□□□□ -2.08
COL4A5P29400 EIF1AXP2-201ENST00000555940 413 ntBASIC2.03□□□□□ -2.08
COL4A5P29400 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.03□□□□□ -2.08
COL4A5P29400 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.03□□□□□ -2.08
COL4A5P29400 AC090616.5-202ENST00000582111 297 ntBASIC2.03□□□□□ -2.08
COL4A5P29400 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.03□□□□□ -2.08
COL4A5P29400 AC073111.2-201ENST00000605657 1075 ntBASIC2.03□□□□□ -2.08
COL4A5P29400 AL512598.1-201ENST00000610158 273 ntBASIC2.03□□□□□ -2.08
COL4A5P29400 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
COL4A5P29400 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.03□□□□□ -2.08
COL4A5P29400 MTND4P34-201ENST00000572715 1371 ntBASIC2.03□□□□□ -2.09
COL4A5P29400 MTND5P35-201ENST00000557537 1720 ntBASIC2.03□□□□□ -2.09
COL4A5P29400 AC011978.2-201ENST00000569835 2054 ntBASIC2.03□□□□□ -2.09
COL4A5P29400 SNORA7.2-201ENST00000364446 145 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 SNORA16.1-201ENST00000364597 132 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 RNU6-53P-201ENST00000365367 106 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 RNU6-1181P-201ENST00000384191 106 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 MIR607-201ENST00000385241 96 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.02□□□□□ -2.09
COL4A5P29400 AC241520.1-201ENST00000422654 1099 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 AC073310.1-201ENST00000423226 1033 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A5P29400 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.02□□□□□ -2.09
COL4A5P29400 CKS1BP5-201ENST00000434172 273 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 AL590664.1-201ENST00000448065 339 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 snoU13.7-201ENST00000459220 104 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.02□□□□□ -2.09
COL4A5P29400 AC069528.1-202ENST00000482888 637 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 AC107398.1-201ENST00000486904 505 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 AC135721.1-201ENST00000497954 479 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.02□□□□□ -2.09
COL4A5P29400 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A5P29400 AC010265.1-201ENST00000513509 211 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 AC104115.2-201ENST00000523026 687 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 AC087441.2-201ENST00000529141 262 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms