Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.9□□□□□ -1.62
ITGA4P13612 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
ITGA4P13612 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.9□□□□□ -1.62
ITGA4P13612 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
ITGA4P13612 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
ITGA4P13612 RNU6-263P-201ENST00000363811 107 ntBASIC4.9□□□□□ -1.63
ITGA4P13612 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ITGA4P13612 Y_RNA.576-201ENST00000384781 102 ntBASIC4.9□□□□□ -1.63
ITGA4P13612 RNU6-754P-201ENST00000391166 107 ntBASIC4.9□□□□□ -1.63
ITGA4P13612 UBE2FP1-201ENST00000416536 447 ntBASIC4.9□□□□□ -1.63
ITGA4P13612 RPS29P17-201ENST00000430795 166 ntBASIC4.9□□□□□ -1.63
ITGA4P13612 RPS20P1-201ENST00000434853 354 ntBASIC4.9□□□□□ -1.63
ITGA4P13612 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.9□□□□□ -1.63
ITGA4P13612 PPIAP3-201ENST00000450588 505 ntBASIC4.9□□□□□ -1.63
ITGA4P13612 AC234775.1-201ENST00000454247 670 ntBASIC4.9□□□□□ -1.63
ITGA4P13612 RN7SL810P-201ENST00000493031 276 ntBASIC4.9□□□□□ -1.63
ITGA4P13612 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.9□□□□□ -1.63
ITGA4P13612 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.9□□□□□ -1.63
ITGA4P13612 RNU6-273P-201ENST00000516937 96 ntBASIC4.9□□□□□ -1.63
ITGA4P13612 RN7SKP234-201ENST00000517173 224 ntBASIC4.9□□□□□ -1.63
ITGA4P13612 SNORA25.17-201ENST00000517184 124 ntBASIC4.9□□□□□ -1.63
ITGA4P13612 TRMT10BP1-201ENST00000519377 943 ntBASIC4.9□□□□□ -1.63
ITGA4P13612 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.9□□□□□ -1.63
ITGA4P13612 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.9□□□□□ -1.63
ITGA4P13612 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.9□□□□□ -1.63
ITGA4P13612 MIR3942-201ENST00000585264 109 ntBASIC4.9□□□□□ -1.63
ITGA4P13612 AC067852.4-201ENST00000590314 478 ntBASIC4.9□□□□□ -1.63
ITGA4P13612 AL669831.4-202ENST00000590817 238 ntBASIC4.9□□□□□ -1.63
ITGA4P13612 AC020634.1-201ENST00000608701 549 ntBASIC4.9□□□□□ -1.63
ITGA4P13612 AC134503.1-201ENST00000633048 54 ntBASIC4.9□□□□□ -1.63
ITGA4P13612 OR52H1-202ENST00000641796 1061 ntBASIC4.9□□□□□ -1.63
ITGA4P13612 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.9□□□□□ -1.63
ITGA4P13612 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
ITGA4P13612 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ITGA4P13612 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ITGA4P13612 CPHL1P-201ENST00000461341 3407 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ITGA4P13612 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
ITGA4P13612 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
ITGA4P13612 RNU6-1287P-201ENST00000362914 107 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 Y_RNA.167-201ENST00000363735 109 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 RNU6-960P-201ENST00000364056 120 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 RNA5SP151-201ENST00000365632 117 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 RNU6-43P-201ENST00000384302 107 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 RNU6-1297P-201ENST00000384415 104 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 RNU6-1060P-201ENST00000384664 107 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 MIR921-201ENST00000401133 56 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 AL592114.1-201ENST00000403842 483 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 MIR548P-201ENST00000408336 84 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 RNA5SP56-201ENST00000410277 118 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 RPL21P24-201ENST00000413752 448 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 AL138785.1-201ENST00000425821 331 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 HMGB3P21-201ENST00000452483 547 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 RN7SL303P-201ENST00000469773 251 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 AC010618.1-201ENST00000469924 477 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.89□□□□□ -1.63
ITGA4P13612 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.89□□□□□ -1.63
ITGA4P13612 Y_RNA.654-201ENST00000497848 106 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 MTND5P5-201ENST00000503764 376 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.89□□□□□ -1.63
ITGA4P13612 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.89□□□□□ -1.63
ITGA4P13612 KLHL2P1-201ENST00000508691 521 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 AC104806.1-201ENST00000508720 308 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 RNU6-1045P-201ENST00000516321 107 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 HMGN1P28-201ENST00000521340 364 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.89□□□□□ -1.63
ITGA4P13612 AP003385.6-201ENST00000531603 374 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 AL137161.1-201ENST00000532231 390 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.89□□□□□ -1.63
ITGA4P13612 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.89□□□□□ -1.63
ITGA4P13612 LLPHP1-201ENST00000603571 367 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 AL592436.1-201ENST00000605135 558 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.89□□□□□ -1.63
ITGA4P13612 MTND4LP32-201ENST00000636111 270 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
ITGA4P13612 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ITGA4P13612 AC092435.4-201ENST00000623012 4159 ntBASIC4.89□□□□□ -1.63
ITGA4P13612 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
ITGA4P13612 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
ITGA4P13612 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.88□□□□□ -1.63
ITGA4P13612 API5P2-201ENST00000397055 1498 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.88□□□□□ -1.63
ITGA4P13612 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
ITGA4P13612 EXOC5P1-201ENST00000510543 1969 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
ITGA4P13612 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.88□□□□□ -1.63
ITGA4P13612 RNU6-1013P-201ENST00000384180 107 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 RNA5SP372-201ENST00000390836 115 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 SOD2P1-201ENST00000396543 562 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 MIR1250-201ENST00000408098 113 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 RNU4-65P-201ENST00000410473 140 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 AC009237.10-201ENST00000414112 510 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.88□□□□□ -1.63
ITGA4P13612 MTCO2P27-201ENST00000420740 428 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.88□□□□□ -1.63
ITGA4P13612 PHBP16-201ENST00000446318 950 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 AC020550.1-201ENST00000447385 163 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 AC012671.1-201ENST00000451912 203 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms