Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 TPT1P12-201ENST00000448968 492 ntBASIC5.39□□□□□ -1.55
HOXD8P13378 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXD8P13378 RN7SL817P-201ENST00000480777 288 ntBASIC5.39□□□□□ -1.55
HOXD8P13378 AC016065.2-201ENST00000514530 444 ntBASIC5.39□□□□□ -1.55
HOXD8P13378 AC105031.1-201ENST00000518550 476 ntBASIC5.39□□□□□ -1.55
HOXD8P13378 AC134698.5-201ENST00000519444 336 ntBASIC5.39□□□□□ -1.55
HOXD8P13378 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXD8P13378 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXD8P13378 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXD8P13378 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXD8P13378 AL031176.1-201ENST00000604554 466 ntBASIC5.39□□□□□ -1.55
HOXD8P13378 AC107871.2-201ENST00000612894 502 ntBASIC5.39□□□□□ -1.55
HOXD8P13378 AL606534.2-204ENST00000635008 178 ntBASIC5.39□□□□□ -1.55
HOXD8P13378 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXD8P13378 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
HOXD8P13378 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXD8P13378 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXD8P13378 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXD8P13378 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXD8P13378 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXD8P13378 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXD8P13378 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXD8P13378 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXD8P13378 AC022893.2-201ENST00000564832 3296 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXD8P13378 Y_RNA.314-201ENST00000365114 102 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 SMIM11P1-201ENST00000369586 178 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 RNU6-701P-201ENST00000384059 107 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 RNU6-190P-201ENST00000384154 102 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 MIR129-1-201ENST00000384972 72 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 RNA5SP397-201ENST00000391323 118 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 AC096664.2-201ENST00000411843 406 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 AC079809.1-201ENST00000415468 276 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 RPL23AP1-201ENST00000428990 471 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 DYNLT3P2-201ENST00000442517 295 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 AC010655.1-201ENST00000449336 292 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 snoU13.1-201ENST00000459157 104 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 AC008571.1-201ENST00000467232 300 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 AP000926.1-201ENST00000479573 241 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 AC090686.1-201ENST00000481577 749 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 RN7SL558P-201ENST00000497468 299 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXD8P13378 SNORA70.11-201ENST00000515987 138 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 RNU2-69P-201ENST00000516061 100 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 RNU6-475P-201ENST00000516073 104 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 SNORA70.13-201ENST00000516116 138 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 RNU6-390P-201ENST00000516259 103 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXD8P13378 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXD8P13378 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXD8P13378 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXD8P13378 AC006254.3-201ENST00000603353 884 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 AL161423.1-201ENST00000613700 262 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 AC123768.4-201ENST00000616244 701 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 AC015967.1-201ENST00000619893 476 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 AC110801.1-201ENST00000623590 212 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 AC074029.4-201ENST00000624796 1859 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 ZFRP1-201ENST00000457579 2970 ntBASIC5.38□□□□□ -1.55
HOXD8P13378 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
HOXD8P13378 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXD8P13378 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXD8P13378 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HOXD8P13378 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXD8P13378 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXD8P13378 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXD8P13378 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD8P13378 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD8P13378 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD8P13378 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD8P13378 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD8P13378 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
HOXD8P13378 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD8P13378 AC125257.1-201ENST00000560400 2930 ntBASIC5.37□□□□□ -1.55
HOXD8P13378 Y_RNA.461-201ENST00000384263 103 ntBASIC5.37□□□□□ -1.55
HOXD8P13378 RNU6-1026P-201ENST00000384465 108 ntBASIC5.37□□□□□ -1.55
HOXD8P13378 RN7SKP106-201ENST00000410832 272 ntBASIC5.37□□□□□ -1.55
HOXD8P13378 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.37□□□□□ -1.55
HOXD8P13378 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXD8P13378 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXD8P13378 AL353752.1-201ENST00000454946 260 ntBASIC5.37□□□□□ -1.55
HOXD8P13378 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXD8P13378 AC068781.1-201ENST00000488231 618 ntBASIC5.37□□□□□ -1.55
HOXD8P13378 AC073073.1-201ENST00000493920 463 ntBASIC5.37□□□□□ -1.55
HOXD8P13378 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXD8P13378 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXD8P13378 RN7SKP92-201ENST00000517266 244 ntBASIC5.37□□□□□ -1.55
HOXD8P13378 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXD8P13378 AC022616.4-201ENST00000522985 181 ntBASIC5.37□□□□□ -1.55
HOXD8P13378 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXD8P13378 AC007375.1-201ENST00000554513 578 ntBASIC5.37□□□□□ -1.55
HOXD8P13378 MIR4284-201ENST00000578924 81 ntBASIC5.37□□□□□ -1.55
HOXD8P13378 MIR4715-201ENST00000584117 79 ntBASIC5.37□□□□□ -1.55
HOXD8P13378 AC011494.1-201ENST00000596454 237 ntBASIC5.37□□□□□ -1.55
HOXD8P13378 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXD8P13378 AC004805.2-201ENST00000605382 482 ntBASIC5.37□□□□□ -1.55
HOXD8P13378 AC006329.2-201ENST00000611491 394 ntBASIC5.37□□□□□ -1.55
HOXD8P13378 AL359547.2-201ENST00000615810 418 ntBASIC5.37□□□□□ -1.55
HOXD8P13378 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXD8P13378 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXD8P13378 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms