Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RPS3AP24-201ENST00000407896 734 ntBASIC3.66□□□□□ -1.82
RB1P06400 RNA5SP129-201ENST00000410276 118 ntBASIC3.66□□□□□ -1.82
RB1P06400 HMGN1P24-201ENST00000412282 298 ntBASIC3.66□□□□□ -1.82
RB1P06400 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.66□□□□□ -1.82
RB1P06400 RPL21P109-201ENST00000422213 475 ntBASIC3.66□□□□□ -1.82
RB1P06400 AL353678.1-201ENST00000422735 741 ntBASIC3.66□□□□□ -1.82
RB1P06400 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.66□□□□□ -1.82
RB1P06400 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.66□□□□□ -1.82
RB1P06400 OR4K11P-201ENST00000431829 904 ntBASIC3.66□□□□□ -1.82
RB1P06400 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.66□□□□□ -1.82
RB1P06400 UBE2V1P13-201ENST00000436983 439 ntBASIC3.66□□□□□ -1.82
RB1P06400 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.66□□□□□ -1.82
RB1P06400 FAM103A2P-201ENST00000444122 354 ntBASIC3.66□□□□□ -1.82
RB1P06400 RPS29P31-201ENST00000446147 164 ntBASIC3.66□□□□□ -1.82
RB1P06400 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.66□□□□□ -1.82
RB1P06400 RNA5SP468-201ENST00000516782 93 ntBASIC3.66□□□□□ -1.82
RB1P06400 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RB1P06400 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.66□□□□□ -1.82
RB1P06400 AC004024.1-201ENST00000549244 247 ntBASIC3.66□□□□□ -1.82
RB1P06400 SETP2-201ENST00000553886 926 ntBASIC3.66□□□□□ -1.82
RB1P06400 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.66□□□□□ -1.82
RB1P06400 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.66□□□□□ -1.82
RB1P06400 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.66□□□□□ -1.82
RB1P06400 MIR4307-201ENST00000582802 84 ntBASIC3.66□□□□□ -1.82
RB1P06400 UBE2L4-201ENST00000587688 464 ntBASIC3.66□□□□□ -1.82
RB1P06400 AP001429.1-201ENST00000602568 530 ntBASIC3.66□□□□□ -1.82
RB1P06400 AL357094.1-201ENST00000603845 844 ntBASIC3.66□□□□□ -1.82
RB1P06400 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.66□□□□□ -1.82
RB1P06400 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RB1P06400 PLCE1P1-201ENST00000622094 305 ntBASIC3.66□□□□□ -1.82
RB1P06400 AL158801.5-201ENST00000623123 465 ntBASIC3.66□□□□□ -1.82
RB1P06400 AC078883.4-201ENST00000623218 367 ntBASIC3.66□□□□□ -1.82
RB1P06400 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.66□□□□□ -1.82
RB1P06400 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RB1P06400 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RB1P06400 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RB1P06400 AC009812.4-201ENST00000569134 1805 ntBASIC3.65□□□□□ -1.82
RB1P06400 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
RB1P06400 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.82
RB1P06400 Y_RNA.97-201ENST00000363094 102 ntBASIC3.65□□□□□ -1.83
RB1P06400 RNU6-501P-201ENST00000364072 100 ntBASIC3.65□□□□□ -1.83
RB1P06400 DEFB109C-201ENST00000382575 264 ntBASIC3.65□□□□□ -1.83
RB1P06400 DEFB109B-201ENST00000382656 264 ntBASIC3.65□□□□□ -1.83
RB1P06400 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RB1P06400 U8.14-201ENST00000390843 143 ntBASIC3.65□□□□□ -1.83
RB1P06400 AL031577.2-201ENST00000404133 280 ntBASIC3.65□□□□□ -1.83
RB1P06400 RNU6-920P-201ENST00000410926 92 ntBASIC3.65□□□□□ -1.83
RB1P06400 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.65□□□□□ -1.83
RB1P06400 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.65□□□□□ -1.83
RB1P06400 RPS27AP14-201ENST00000422868 454 ntBASIC3.65□□□□□ -1.83
RB1P06400 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.65□□□□□ -1.83
RB1P06400 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.65□□□□□ -1.83
RB1P06400 AC097262.1-201ENST00000452559 548 ntBASIC3.65□□□□□ -1.83
RB1P06400 ZNF114P1-201ENST00000453500 292 ntBASIC3.65□□□□□ -1.83
RB1P06400 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.65□□□□□ -1.83
RB1P06400 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.65□□□□□ -1.83
RB1P06400 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.65□□□□□ -1.83
RB1P06400 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.65□□□□□ -1.83
RB1P06400 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.65□□□□□ -1.83
RB1P06400 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.65□□□□□ -1.83
RB1P06400 AC026801.2-201ENST00000515352 425 ntBASIC3.65□□□□□ -1.83
RB1P06400 RNA5SP341-201ENST00000516261 117 ntBASIC3.65□□□□□ -1.83
RB1P06400 SNORA31.8-201ENST00000516327 108 ntBASIC3.65□□□□□ -1.83
RB1P06400 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.65□□□□□ -1.83
RB1P06400 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.65□□□□□ -1.83
RB1P06400 MED28P6-201ENST00000558776 231 ntBASIC3.65□□□□□ -1.83
RB1P06400 PCMTD1P2-201ENST00000565017 355 ntBASIC3.65□□□□□ -1.83
RB1P06400 MIR3186-201ENST00000577404 85 ntBASIC3.65□□□□□ -1.83
RB1P06400 WISP1-OT1-201ENST00000602893 642 ntBASIC3.65□□□□□ -1.83
RB1P06400 AC091965.4-201ENST00000607691 587 ntBASIC3.65□□□□□ -1.83
RB1P06400 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.65□□□□□ -1.83
RB1P06400 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.65□□□□□ -1.83
RB1P06400 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
RB1P06400 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RB1P06400 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RB1P06400 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
RB1P06400 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RB1P06400 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.65□□□□□ -1.83
RB1P06400 AC009902.3-201ENST00000606235 2172 ntBASIC3.65□□□□□ -1.83
RB1P06400 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.65□□□□□ -1.83
RB1P06400 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
RB1P06400 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RB1P06400 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
RB1P06400 AC007656.2-201ENST00000624902 4547 ntBASIC3.64□□□□□ -1.83
RB1P06400 RNU1-18P-201ENST00000363062 164 ntBASIC3.64□□□□□ -1.83
RB1P06400 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.64□□□□□ -1.83
RB1P06400 SNORD116-8-201ENST00000384365 95 ntBASIC3.64□□□□□ -1.83
RB1P06400 AL357075.1-201ENST00000404107 726 ntBASIC3.64□□□□□ -1.83
RB1P06400 AL359704.1-201ENST00000411586 781 ntBASIC3.64□□□□□ -1.83
RB1P06400 AC109780.2-201ENST00000413467 845 ntBASIC3.64□□□□□ -1.83
RB1P06400 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.64□□□□□ -1.83
RB1P06400 USP9YP36-201ENST00000424581 829 ntBASIC3.64□□□□□ -1.83
RB1P06400 AC024082.2-201ENST00000434771 238 ntBASIC3.64□□□□□ -1.83
RB1P06400 LARP1BP3-201ENST00000437229 869 ntBASIC3.64□□□□□ -1.83
RB1P06400 THAP5P1-201ENST00000439089 262 ntBASIC3.64□□□□□ -1.83
RB1P06400 RPL7P36-201ENST00000444633 681 ntBASIC3.64□□□□□ -1.83
RB1P06400 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.64□□□□□ -1.83
RB1P06400 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.64□□□□□ -1.83
RB1P06400 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.64□□□□□ -1.83
RB1P06400 AL109653.1-201ENST00000603091 248 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms